=== Generating (published_papers) ===
=== Generating (research_interests) ===
=== Generating (teaching_experience) ===
=== Generating (education) ===
=== Generating (misc) ===
=== Generating (research_projects) ===
=== Generating (books_etc) ===
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==== begin registerFile(/WWW/pub2/data/ERD/person/124426/researchmap/published_papers.jsonl) ====
line:1, {"insert":{"user_id":"B000001705","type":"published_papers","id":"42872999"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/36898586","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=398602","label":"url"}],"paper_title":{"en":"A simple method to differentiate three classes of cholesterol-dependent cytolysins.","ja":"A simple method to differentiate three classes of cholesterol-dependent cytolysins."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Matsumoto Airi"},{"name":"Takao Ayuko"},{"name":"Tabata Atsushi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"松本 愛理"},{"name":"Takao Ayuko"},{"name":"田端 厚之"},{"name":"長宗 秀明"}]},"description":{"en":"Cholesterol-dependent cytolysins (CDCs) are proteinaceous toxins widely distributed in gram-positive pathogenic bacteria. CDCs can be classified into three groups (I-III) based on the mode of receptor recognition. Group I CDCs recognize cholesterol as their receptor. Group II CDC specifically recognizes human CD59 as the primary receptor on the cell membrane. Only intermedilysin from Streptococcus intermedius has been reported as a group II CDC. Group III CDCs recognize both human CD59 and cholesterol as receptors. CD59 contains five disulfide bridges in its tertiary structure. Therefore, we treated human erythrocytes with dithiothreitol (DTT) to inactivate CD59 on membranes. Our data showed that DTT treatment caused a complete loss of recognition of intermedilysin and an anti-human CD59 monoclonal antibody. In contrast, this treatment did not affect the recognition of group I CDCs, judging from the fact that DTT-treated erythrocytes were lysed with the same efficiency as mock-treated human erythrocytes. The recognition of group III CDCs toward DTT-treated erythrocytes was partially reduced, and these results are likely due to the loss of human CD59 recognition. Therefore, the degree of human CD59 and cholesterol requirements of uncharacterized group III CDCs frequently found in Mitis group streptococci can be easily estimated by comparing the amounts of hemolysis between DTT-treated and mock-treated erythrocytes.","ja":"Cholesterol-dependent cytolysins (CDCs) are proteinaceous toxins widely distributed in gram-positive pathogenic bacteria. CDCs can be classified into three groups (I-III) based on the mode of receptor recognition. Group I CDCs recognize cholesterol as their receptor. Group II CDC specifically recognizes human CD59 as the primary receptor on the cell membrane. Only intermedilysin from Streptococcus intermedius has been reported as a group II CDC. Group III CDCs recognize both human CD59 and cholesterol as receptors. CD59 contains five disulfide bridges in its tertiary structure. Therefore, we treated human erythrocytes with dithiothreitol (DTT) to inactivate CD59 on membranes. Our data showed that DTT treatment caused a complete loss of recognition of intermedilysin and an anti-human CD59 monoclonal antibody. In contrast, this treatment did not affect the recognition of group I CDCs, judging from the fact that DTT-treated erythrocytes were lysed with the same efficiency as mock-treated human erythrocytes. The recognition of group III CDCs toward DTT-treated erythrocytes was partially reduced, and these results are likely due to the loss of human CD59 recognition. Therefore, the degree of human CD59 and cholesterol requirements of uncharacterized group III CDCs frequently found in Mitis group streptococci can be easily estimated by comparing the amounts of hemolysis between DTT-treated and mock-treated erythrocytes."},"publication_date":"2023-03-09","publication_name":{"en":"Journal of Microbiological Methods","ja":"Journal of Microbiological Methods"},"volume":"Vol.207","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1016/j.mimet.2023.106696"],"issn":["1872-8359"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:2, {"insert":{"user_id":"B000001705","type":"published_papers","id":"42873000"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/36478453","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=398600","label":"url"}],"paper_title":{"en":"Human serum albumin stabilizes streptolysin S activity secreted in the extracellular milieu by streptolysin S-producing streptococci.","ja":"Human serum albumin stabilizes streptolysin S activity secreted in the extracellular milieu by streptolysin S-producing streptococci."},"authors":{"en":[{"name":"Yokohata Shuto"},{"name":"Ohkura Kazuto"},{"name":"Nagamune Hideaki"},{"name":"Tomoyasu Toshifumi"},{"name":"Tabata Atsushi"}],"ja":[{"name":"Yokohata Shuto"},{"name":"Ohkura Kazuto"},{"name":"長宗 秀明"},{"name":"友安 俊文"},{"name":"田端 厚之"}]},"description":{"en":"Anginosus group streptococci (AGS) are opportunistic pathogens of the human oral cavity; however, their pathogenicity has not been discussed in detail. Oral streptococci live in the gingival sulcus, from where they can easily translocate into the bloodstream due to periodontal diseases and dental treatment and cause hazardous effects on the host through their virulence factors. Streptolysin S (SLS), a pathogenic factor produced by β-hemolytic species/strains belonging to AGS, plays an important role in damaging host cells. Therefore, we investigated the SLS-dependent cytotoxicity of β-hemolytic Streptococcus anginosus subsp. anginosus (SAA), focusing on different growth conditions such as in the bloodstream. Consequently, SLS-dependent hemolytic activity/cytotoxicity in the culture supernatant of β-hemolytic SAA was stabilized by blood components, particularly human serum albumin (HSA). The present study suggests that the secreted SLS, not only from β-hemolytic SAA, but also from other SLS-producing streptococci, is stabilized by HSA. As HSA is the most abundant protein in human plasma, the results of this study provide new insights into the risk of SLS-producing streptococci which can translocate into the bloodstream.","ja":"Anginosus group streptococci (AGS) are opportunistic pathogens of the human oral cavity; however, their pathogenicity has not been discussed in detail. Oral streptococci live in the gingival sulcus, from where they can easily translocate into the bloodstream due to periodontal diseases and dental treatment and cause hazardous effects on the host through their virulence factors. Streptolysin S (SLS), a pathogenic factor produced by β-hemolytic species/strains belonging to AGS, plays an important role in damaging host cells. Therefore, we investigated the SLS-dependent cytotoxicity of β-hemolytic Streptococcus anginosus subsp. anginosus (SAA), focusing on different growth conditions such as in the bloodstream. Consequently, SLS-dependent hemolytic activity/cytotoxicity in the culture supernatant of β-hemolytic SAA was stabilized by blood components, particularly human serum albumin (HSA). The present study suggests that the secreted SLS, not only from β-hemolytic SAA, but also from other SLS-producing streptococci, is stabilized by HSA. As HSA is the most abundant protein in human plasma, the results of this study provide new insights into the risk of SLS-producing streptococci which can translocate into the bloodstream."},"publication_date":"2022-12-28","publication_name":{"en":"Microbiology and Immunology","ja":"Microbiology and Immunology"},"volume":"Vol.67","number":"No.2","starting_page":"58","ending_page":"68","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1111/1348-0421.13042"],"issn":["1348-0421"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:3, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/35937899","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=398604","label":"url"}],"paper_title":{"en":"Dual functions of discoidinolysin, a cholesterol-dependent cytolysin with N-terminal discoidin domain produced from strain Nm-76.","ja":"Dual functions of discoidinolysin, a cholesterol-dependent cytolysin with N-terminal discoidin domain produced from strain Nm-76."},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Matsumoto Airi"},{"name":"Fujimoto Ai"},{"name":"Ohkura Kazuto"},{"name":"Ikeda Takuya"},{"name":"Oda Hiroki"},{"name":"Yokohata Shuto"},{"name":"Kobayashi Miho"},{"name":"Tomoyasu Toshifumi"},{"name":"Takao Ayuko"},{"name":"Ohkuni Hisashi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"松本 愛理"},{"name":"藤本 あい"},{"name":"大倉 一人"},{"name":"池田 拓也"},{"name":"尾田 優紀"},{"name":"横畑 修人"},{"name":"小林 未歩"},{"name":"友安 俊文"},{"name":"Takao Ayuko"},{"name":"大国 寿士"},{"name":"長宗 秀明"}]},"description":{"en":"Some strains of exhibit β-hemolysis due to the β-hemolytic activity of cholesterol-dependent cytolysin (CDC). Recently, a gene encoding an atypical lectinolysin-related CDC was found in strain Nm-76. However, the product of this gene remains uncharacterized. We aimed to characterize this atypical CDC and its molecular functions and contribution to the pathogenicity of strain Nm-76. Phylogenetic analysis of the CDC gene was conducted based on the web-deposited information. The molecular characteristics of CDC were investigated using a gene-deletion mutant strain and recombinant proteins expressed in . The gene encoding CDC found in Nm-76 and its homolog are distributed among many strains. This CDC is phylogenetically different from other previously characterized CDCs, such as -derived human platelet aggregation factor (Sm-hPAF)/lectinolysin and mitilysin. Because this CDC possesses an additional N-terminal domain, including a discoidin motif, it was termed discoidinolysin (DLY). In addition to the preferential lysis of human cells, DLY displayed N-terminal domain-dependent facilitation of human erythrocyte aggregation and intercellular associations between human cells. DLY functions as a hemolysin/cytolysin and erythrocyte aggregation/intercellular association molecule. This dual-function DLY could be an additional virulence factor in .","ja":"Some strains of exhibit β-hemolysis due to the β-hemolytic activity of cholesterol-dependent cytolysin (CDC). Recently, a gene encoding an atypical lectinolysin-related CDC was found in strain Nm-76. However, the product of this gene remains uncharacterized. We aimed to characterize this atypical CDC and its molecular functions and contribution to the pathogenicity of strain Nm-76. Phylogenetic analysis of the CDC gene was conducted based on the web-deposited information. The molecular characteristics of CDC were investigated using a gene-deletion mutant strain and recombinant proteins expressed in . The gene encoding CDC found in Nm-76 and its homolog are distributed among many strains. This CDC is phylogenetically different from other previously characterized CDCs, such as -derived human platelet aggregation factor (Sm-hPAF)/lectinolysin and mitilysin. Because this CDC possesses an additional N-terminal domain, including a discoidin motif, it was termed discoidinolysin (DLY). In addition to the preferential lysis of human cells, DLY displayed N-terminal domain-dependent facilitation of human erythrocyte aggregation and intercellular associations between human cells. DLY functions as a hemolysin/cytolysin and erythrocyte aggregation/intercellular association molecule. This dual-function DLY could be an additional virulence factor in ."},"publication_date":"2022-08-01","publication_name":{"en":"Journal of Oral Microbiology","ja":"Journal of Oral Microbiology"},"volume":"Vol.14","number":"No.1","starting_page":"2105013","ending_page":"2105013","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1080/20002297.2022.2105013"],"issn":["2000-2297"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:4, {"insert":{"user_id":"B000001705","type":"published_papers","id":"39246770"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/35450786","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=387333","label":"url"}],"paper_title":{"en":"Hapten-labeled fusion-polymerase chain reaction of multiple marker genes for the application of immunochromatographic test.","ja":"Hapten-labeled fusion-polymerase chain reaction of multiple marker genes for the application of immunochromatographic test."},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Shirai Rina"},{"name":"Miki Haruka"},{"name":"Nishikawa Yukihiro"},{"name":"Kashima Tatsuya"},{"name":"Aoyama Tomomi"},{"name":"Murakami Shu"},{"name":"Azuma Momoyo"},{"name":"Tomoyasu Toshifumi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"白井 里奈"},{"name":"三木 晴加"},{"name":"Nishikawa Yukihiro"},{"name":"Kashima Tatsuya"},{"name":"Aoyama Tomomi"},{"name":"村上 漱"},{"name":"東 桃代"},{"name":"友安 俊文"},{"name":"長宗 秀明"}]},"description":{"en":"A variety of methods have been reported using polymerase chain reaction (PCR)-based nucleic acid testing (NAT) because of its potential to be used in highly sensitive inspection systems. Among these NATs, fusion-PCR (also called as overlap-extension-PCR) has been focused on this study and adopted to generate the fused amplicon composed of plural marker gene fragments for detection. Generally, conventional agarose gel electrophoresis followed by gel staining is employed to check the PCR results. However, these are time-consuming processes that use specific equipment. To overcome these disadvantages, the immunochromatographic test (ICT) for the detection of PCR amplicons with hapten-labels that were generated by PCR using hapten-labeled primers was also adopted in this study. Based on these concepts, we constructed the systems of hapten-labeled fusion-PCR (HL-FuPCR) followed by ICT (HL-FuPCR-ICT) for the two and three marker genes derived from pathogenic microbe. As a result, we successfully developed a two marker genes system for the pathogenic influenza A virus and a three marker genes system for the penicillin-resistant Streptococcus pneumoniae. These detection systems of HL-FuPCR-ICT are characterized by simple handling and rapid detection within few minutes, and also showed the results as clear lines. Thus, the HL-FuPCR-ICT system introduced in this study has potential for use as a user-friendly inspection tool with the advantages especially in the detection of specific strains or groups expressing the characteristic phenotype(s) such as antibiotic resistance and/or high pathogenicity even in the same species.","ja":"A variety of methods have been reported using polymerase chain reaction (PCR)-based nucleic acid testing (NAT) because of its potential to be used in highly sensitive inspection systems. Among these NATs, fusion-PCR (also called as overlap-extension-PCR) has been focused on this study and adopted to generate the fused amplicon composed of plural marker gene fragments for detection. Generally, conventional agarose gel electrophoresis followed by gel staining is employed to check the PCR results. However, these are time-consuming processes that use specific equipment. To overcome these disadvantages, the immunochromatographic test (ICT) for the detection of PCR amplicons with hapten-labels that were generated by PCR using hapten-labeled primers was also adopted in this study. Based on these concepts, we constructed the systems of hapten-labeled fusion-PCR (HL-FuPCR) followed by ICT (HL-FuPCR-ICT) for the two and three marker genes derived from pathogenic microbe. As a result, we successfully developed a two marker genes system for the pathogenic influenza A virus and a three marker genes system for the penicillin-resistant Streptococcus pneumoniae. These detection systems of HL-FuPCR-ICT are characterized by simple handling and rapid detection within few minutes, and also showed the results as clear lines. Thus, the HL-FuPCR-ICT system introduced in this study has potential for use as a user-friendly inspection tool with the advantages especially in the detection of specific strains or groups expressing the characteristic phenotype(s) such as antibiotic resistance and/or high pathogenicity even in the same species."},"publication_date":"2022-04-18","publication_name":{"en":"Journal of Bioscience and Bioengineering","ja":"Journal of Bioscience and Bioengineering"},"volume":"Vol.134","number":"No.1","starting_page":"70","ending_page":"76","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1016/j.jbiosc.2022.03.006"],"issn":["1347-4421"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:5, {"insert":{"user_id":"B000001705","type":"published_papers","id":"33359794"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/33331679","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=379449","label":"url"}],"paper_title":{"en":"Molecular characteristics of an adhesion molecule containing cholesterol-dependent cytolysin-motif produced by mitis group streptococci","ja":"Molecular characteristics of an adhesion molecule containing cholesterol-dependent cytolysin-motif produced by mitis group streptococci"},"authors":{"en":[{"name":"Matsumoto Airi"},{"name":"Tabata Atsushi"},{"name":"Ohkura Kazuto"},{"name":"Oda Hiroki"},{"name":"Kodama Chihiro"},{"name":"Ohkuni Hisashi"},{"name":"Takao Ayuko"},{"name":"Kikuchi Ken"},{"name":"Tomoyasu Toshifumi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"松本 愛理"},{"name":"田端 厚之"},{"name":"Ohkura Kazuto"},{"name":"尾田 優紀"},{"name":"児玉 千紘"},{"name":"大国 寿士"},{"name":"Takao Ayuko"},{"name":"Kikuchi Ken"},{"name":"友安 俊文"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus pseudopneumoniae (SPpn) is a relatively new species closely related to S. pneumoniae (SPn) and S. mitis (SM) belonging to the Mitis group of the genus Streptococcus (MGS). Although genes encoding various pneumococcal virulence factors have been observed in the SPpn genome, the pathogenicity of SPpn against human, including the roles of virulence factor candidates, is still unclear. The present study focused on and characterized a candidate virulence factor previously reported in SPpn with deduced multiple functional domains, such as lipase domain, two lectin domains, and cholesterol-dependent cytolysin-related domain using various recombinant proteins. The gene was found not only in SPpn but also in the strains of SM and SPn. Moreover, the gene product was expressed in the gene-positive strains as secreted and cell-bound forms. The recombinant of gene product showed lipase activity and human cell-binding activity depending on the function of lectin domain(s), but no hemolytic activity. Thus, based on the distribution of the gene within the MGS and its molecular function, the gene product was named mitilectin (MLC) and its contribution to the potential pathogenicity of the MLC-producing strains was investigated. Consequently, the treatment with anti-MLC antibody and the mlc gene-knockout significantly reduced the human cell-binding activity of MLC-producing strains. Therefore, the multifunctional MLC was suggested to be important as an adhesion molecule in considering the potential pathogenicity of the MLC-producing strains belonging to MGS, such as SPpn and SM.","ja":"Streptococcus pseudopneumoniae (SPpn) is a relatively new species closely related to S. pneumoniae (SPn) and S. mitis (SM) belonging to the Mitis group of the genus Streptococcus (MGS). Although genes encoding various pneumococcal virulence factors have been observed in the SPpn genome, the pathogenicity of SPpn against human, including the roles of virulence factor candidates, is still unclear. The present study focused on and characterized a candidate virulence factor previously reported in SPpn with deduced multiple functional domains, such as lipase domain, two lectin domains, and cholesterol-dependent cytolysin-related domain using various recombinant proteins. The gene was found not only in SPpn but also in the strains of SM and SPn. Moreover, the gene product was expressed in the gene-positive strains as secreted and cell-bound forms. The recombinant of gene product showed lipase activity and human cell-binding activity depending on the function of lectin domain(s), but no hemolytic activity. Thus, based on the distribution of the gene within the MGS and its molecular function, the gene product was named mitilectin (MLC) and its contribution to the potential pathogenicity of the MLC-producing strains was investigated. Consequently, the treatment with anti-MLC antibody and the mlc gene-knockout significantly reduced the human cell-binding activity of MLC-producing strains. Therefore, the multifunctional MLC was suggested to be important as an adhesion molecule in considering the potential pathogenicity of the MLC-producing strains belonging to MGS, such as SPpn and SM."},"publication_date":"2021-02","publication_name":{"en":"Microbiology and Immunology","ja":"Microbiology and Immunology"},"volume":"Vol.65","number":"No.2","starting_page":"61","ending_page":"75","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1111/1348-0421.12868"],"issn":["1348-0421"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:6, {"insert":{"user_id":"B000001705","type":"published_papers","id":"31432612"},"force":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/116462","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/33414340","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=373153","label":"url"}],"paper_title":{"en":"Complete Genome Sequence of Streptococcus mitis Strain Nm-65, Isolated from a Patient with Kawasaki Disease","ja":"Complete Genome Sequence of Streptococcus mitis Strain Nm-65, Isolated from a Patient with Kawasaki Disease"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Ohkuni Hisashi"},{"name":"Itoh Yasuhiko"},{"name":"Fukunaga Yoshitaka"},{"name":"Tomoyasu Toshifumi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"大国 寿士"},{"name":"Itoh Yasuhiko"},{"name":"Fukunaga Yoshitaka"},{"name":"友安 俊文"},{"name":"長宗 秀明"}]},"description":{"en":"Nm-65 is a human commensal streptococcal strain of the mitis group that was isolated from the tooth surface of a patient with Kawasaki disease. The complete genome sequence of Nm-65 was obtained by means of hybrid assembly, using two next-generation sequencing data sets. The final assembly size was 2,085,837 bp, with 2,039 coding sequences.","ja":"Nm-65 is a human commensal streptococcal strain of the mitis group that was isolated from the tooth surface of a patient with Kawasaki disease. The complete genome sequence of Nm-65 was obtained by means of hybrid assembly, using two next-generation sequencing data sets. The final assembly size was 2,085,837 bp, with 2,039 coding sequences."},"publication_date":"2021-01-07","publication_name":{"en":"Microbiology Resource Announcements","ja":"Microbiology Resource Announcements"},"volume":"Vol.10","number":"No.1","starting_page":"e01239-20","ending_page":"e01239-20","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/MRA.01239-20"],"issn":["2576-098X"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:7, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401623"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/32731044","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-85088967403&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=369501","label":"url"}],"paper_title":{"en":"Cytotoxic property of Streptococcus mitis strain producing two different types of cholesterol-dependent cytolysins","ja":"Cytotoxic property of Streptococcus mitis strain producing two different types of cholesterol-dependent cytolysins"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Ohkuni Hisashi"},{"name":"Hino Haruka"},{"name":"Saigo Takuya"},{"name":"Kodama Chihiro"},{"name":"TANG QING"},{"name":"Tomoyasu Toshifumi"},{"name":"Fukunaga Yoshitaka"},{"name":"Itoh Yasuhiko"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"大国 寿士"},{"name":"日野 はるか"},{"name":"西郷 琢也"},{"name":"児玉 千紘"},{"name":"唐 卿"},{"name":"友安 俊文"},{"name":"福永 慶隆"},{"name":"伊藤 保彦"},{"name":"長宗 秀明"}]},"publication_date":"2020-07","publication_name":{"en":"Infection, Genetics and Evolution","ja":"Infection, Genetics and Evolution"},"volume":"Vol.85","starting_page":"104483","ending_page":"104483","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1016/j.meegid.2020.104483"],"issn":["1567-1348"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:8, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401624"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/32229266","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-85082519032&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=367416","label":"url"}],"paper_title":{"en":"A photometric pH assay for microplate bacterial cultures.","ja":"A photometric pH assay for microplate bacterial cultures."},"authors":{"en":[{"name":"Takao Ayuko"},{"name":"Tomoyasu Toshifumi"},{"name":"Tabata Atsushi"},{"name":"Nagamune Hideaki"},{"name":"Maeda Nobuko"}],"ja":[{"name":"高尾 亞由子"},{"name":"友安 俊文"},{"name":"田端 厚之"},{"name":"長宗 秀明"},{"name":"前田 伸子"}]},"description":{"en":"A photometric pH assay for sugar-fermenting bacterial culture on a 96-well plate was developed. This assay can save time and effort in repeat handlings. Its use could decrease the risk of bacterial contamination in measurement devices and leakage into the environment. The assay's pH estimation range was pH 4.2-7.6.","ja":"A photometric pH assay for sugar-fermenting bacterial culture on a 96-well plate was developed. This assay can save time and effort in repeat handlings. Its use could decrease the risk of bacterial contamination in measurement devices and leakage into the environment. The assay's pH estimation range was pH 4.2-7.6."},"publication_date":"2020-05-27","publication_name":{"en":"Journal of Microbiological Methods","ja":"Journal of Microbiological Methods"},"volume":"Vol.172","starting_page":"1","ending_page":"3","languages":["kor"],"referee":true,"identifiers":{"doi":["10.1016/j.mimet.2020.105910"],"issn":["1872-8359"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:9, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/113540","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/31105901","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-85065585236&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=352306","label":"url"}],"paper_title":{"en":"β-Hemolytic Streptococcus anginosus subsp. anginosus causes streptolysin S-dependent cytotoxicity to human cell culture lines in vitro","ja":"β-Hemolytic Streptococcus anginosus subsp. anginosus causes streptolysin S-dependent cytotoxicity to human cell culture lines in vitro"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Yamada Takuya"},{"name":"Hiromi Ohtani"},{"name":"Ohkura Kazuto"},{"name":"Tomoyasu Toshifumi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"山田 拓矢"},{"name":"大谷 浩美"},{"name":"大倉 一人"},{"name":"友安 俊文"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus anginosus subsp. (SAA) is one of the opportunistic pathogens in humans that inhabits the oral cavity. The type strain of SAA, NCTC10713, showed clear β-hemolysis on blood agar plates, and the sole β-hemolytic factor revealed two streptolysin S (SLS) molecules. SLS is well known as the peptide hemolysin produced from the human pathogen and shows not only hemolytic activity on erythrocytes but also cytotoxic activity in cell culture lines and , such as in a mouse infection model. However, no cytotoxic activity of SLS produced from β-hemolytic SAA (β-SAA) has been reported so far. In this study, the SLS-dependent cytotoxicity of the β-SAA strains including the genetically modified strains was investigated . The SLS-producing β-SAA showed cytotoxicity in human cell culture lines under the co-cultivation condition and it was found that this cytotoxicity was caused by the SLS secreted into the extracellular milieu. The results from this study suggest that the SLS produced from β-SAA might indicate the cytotoxic potential similar to that of the SLS from and the SLS-producing β-SAA would be recognized as \"a wolf in sheep's clothing\" More attention will be paid to the pathogenicity of β-hemolytic Anginosus group streptococci.","ja":"Streptococcus anginosus subsp. (SAA) is one of the opportunistic pathogens in humans that inhabits the oral cavity. The type strain of SAA, NCTC10713, showed clear β-hemolysis on blood agar plates, and the sole β-hemolytic factor revealed two streptolysin S (SLS) molecules. SLS is well known as the peptide hemolysin produced from the human pathogen and shows not only hemolytic activity on erythrocytes but also cytotoxic activity in cell culture lines and , such as in a mouse infection model. However, no cytotoxic activity of SLS produced from β-hemolytic SAA (β-SAA) has been reported so far. In this study, the SLS-dependent cytotoxicity of the β-SAA strains including the genetically modified strains was investigated . The SLS-producing β-SAA showed cytotoxicity in human cell culture lines under the co-cultivation condition and it was found that this cytotoxicity was caused by the SLS secreted into the extracellular milieu. The results from this study suggest that the SLS produced from β-SAA might indicate the cytotoxic potential similar to that of the SLS from and the SLS-producing β-SAA would be recognized as \"a wolf in sheep's clothing\" More attention will be paid to the pathogenicity of β-hemolytic Anginosus group streptococci."},"publication_date":"2019-05-08","publication_name":{"en":"Journal of Oral Microbiology","ja":"Journal of Oral Microbiology"},"volume":"Vol.11","number":"No.1","starting_page":"1","ending_page":"11","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1080/20002297.2019.1609839"],"issn":["2000-2297"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:10, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401625"},"force":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/115748","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/30239035","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-85056121796&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=348373","label":"url"}],"paper_title":{"en":"Recognizability of heterologous co-chaperones with Streptococcus intermedius DnaK and Escherichia coli DnaK","ja":"Recognizability of heterologous co-chaperones with Streptococcus intermedius DnaK and Escherichia coli DnaK"},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Tsuruno Keigo"},{"name":"Tanatsugu Ryosuke"},{"name":"Miyazaki Aya"},{"name":"Kondo Hiroyuki"},{"name":"Tabata Atsushi"},{"name":"Robert A. Whiley"},{"name":"Sonomoto Kenji"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"鶴野 圭悟"},{"name":"棚次 亮介"},{"name":"宮崎 彩"},{"name":"近藤 博之"},{"name":"田端 厚之"},{"name":"Robert A. Whiley"},{"name":"園元 謙二"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus intermedius DnaK complements the temperature-sensitive phenotype of an Escherichia coli dnaK null mutant only when co-chaperones DnaJ and GrpE are co-expressed. Therefore, whether S. intermedius DnaK and E. coli DnaK can recognize heterologous co-chaperones in vitro was examined. Addition of heterologous GrpE to DnaK and DnaJ partially stimulated adenosine triphosphatase (ATPase) activity, and almost completely stimulated luciferase refolding activity. Addition of heterologous DnaJ to GrpE and DnaK also stimulated ATPase activity; however, significant luciferase refolding activity was not observed. Moreover, E. coli DnaJ had a negative effect on the luciferase refolding activity of the S. intermedius DnaK chaperone system. In E. coli chaperone mutants, with the exception of E. coli DnaJ, stronger expression of the heterologous co-chaperones partially or almost completely complemented the temperature-sensitive-phenotype. These results indicate that all heterologous co-chaperones can at least partially recognize DnaK of a distantly related species. A region of the ATPase domain that is present in the DnaK of gram-negative bacteria is absent from the DnaK of gram-positive bacteria. This region is believed to be important for recognition of co-chaperones from gram-negative bacteria. However, insertion of this segment into S. intermedius DnaK failed to increase its ability to recognize E. coli co-chaperones, implying that this region is unnecessary or insufficient for the recognition of E. coli co-chaperones. Thus, our data suggest that a basic structural similarity is conserved among the components of the S. intermedius and E. coli DnaK chaperone systems, allowing weak associations between heterologous components.","ja":"Streptococcus intermedius DnaK complements the temperature-sensitive phenotype of an Escherichia coli dnaK null mutant only when co-chaperones DnaJ and GrpE are co-expressed. Therefore, whether S. intermedius DnaK and E. coli DnaK can recognize heterologous co-chaperones in vitro was examined. Addition of heterologous GrpE to DnaK and DnaJ partially stimulated adenosine triphosphatase (ATPase) activity, and almost completely stimulated luciferase refolding activity. Addition of heterologous DnaJ to GrpE and DnaK also stimulated ATPase activity; however, significant luciferase refolding activity was not observed. Moreover, E. coli DnaJ had a negative effect on the luciferase refolding activity of the S. intermedius DnaK chaperone system. In E. coli chaperone mutants, with the exception of E. coli DnaJ, stronger expression of the heterologous co-chaperones partially or almost completely complemented the temperature-sensitive-phenotype. These results indicate that all heterologous co-chaperones can at least partially recognize DnaK of a distantly related species. A region of the ATPase domain that is present in the DnaK of gram-negative bacteria is absent from the DnaK of gram-positive bacteria. This region is believed to be important for recognition of co-chaperones from gram-negative bacteria. However, insertion of this segment into S. intermedius DnaK failed to increase its ability to recognize E. coli co-chaperones, implying that this region is unnecessary or insufficient for the recognition of E. coli co-chaperones. Thus, our data suggest that a basic structural similarity is conserved among the components of the S. intermedius and E. coli DnaK chaperone systems, allowing weak associations between heterologous components."},"publication_date":"2018-09","publication_name":{"en":"Microbiology and Immunology","ja":"Microbiology and Immunology"},"volume":"Vol.62","number":"No.11","starting_page":"681","ending_page":"693","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1111/1348-0421.12651"],"issn":["1348-0421"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:11, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401626"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/29970568","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-85049804969&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=348369","label":"url"}],"paper_title":{"en":"Construction of Anti-HER2 Recombinants as Targeting Modules for a Drug-delivery System Against HER2-positive Cells","ja":"Construction of Anti-HER2 Recombinants as Targeting Modules for a Drug-delivery System Against HER2-positive Cells"},"authors":{"en":[{"name":"Tang Qing"},{"name":"Onitsuka Masayoshi"},{"name":"Tabata Atsushi"},{"name":"Tomoyasu Toshifumi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"唐 卿"},{"name":"鬼塚 正義"},{"name":"田端 厚之"},{"name":"友安 俊文"},{"name":"長宗 秀明"}]},"description":{"en":"Recombinant antibodies have been investigated and used in applications such as targeting modules of drug-delivery systems (DDS) against cancers. This study aimed to prepare recombinant antibodies against HER2, containing sortase A (SrtA) recognition sequence, that are applicable as targeting modules in DDS after linkage with the drug-carrier containing oligoglycine-acceptor peptide by SrtA transpeptidation. The recombinant trastuzumab fragment antibodies (scFvs and Fab) with the SrtA-recognition motif (LPXTG) at their C-terminal were constructed and expressed in Escherichia coli and Chinese hamster ovary (CHO) cells, respectively. The reactivity of the purified recombinant antibodies towards HER2-expressing cells was also evaluated via immunofluorescent staining. Fab demonstrated higher yield and purity and better reactivity towards HER2-expressing cells (HCT-15 and HeLa) when compared to scFvs. The CHO expression system possesses superior yield and purity when compared to the E. coli expression system with respect to the preparation of recombinant antibodies applicable in targeting modules for DDS (DDS-TM). Moreover, a Fab variant prepared in this study demonstrated the potential to be a DDS-TM against HER2-expressing cancer cells.","ja":"Recombinant antibodies have been investigated and used in applications such as targeting modules of drug-delivery systems (DDS) against cancers. This study aimed to prepare recombinant antibodies against HER2, containing sortase A (SrtA) recognition sequence, that are applicable as targeting modules in DDS after linkage with the drug-carrier containing oligoglycine-acceptor peptide by SrtA transpeptidation. The recombinant trastuzumab fragment antibodies (scFvs and Fab) with the SrtA-recognition motif (LPXTG) at their C-terminal were constructed and expressed in Escherichia coli and Chinese hamster ovary (CHO) cells, respectively. The reactivity of the purified recombinant antibodies towards HER2-expressing cells was also evaluated via immunofluorescent staining. Fab demonstrated higher yield and purity and better reactivity towards HER2-expressing cells (HCT-15 and HeLa) when compared to scFvs. The CHO expression system possesses superior yield and purity when compared to the E. coli expression system with respect to the preparation of recombinant antibodies applicable in targeting modules for DDS (DDS-TM). Moreover, a Fab variant prepared in this study demonstrated the potential to be a DDS-TM against HER2-expressing cancer cells."},"publication_date":"2018-07","publication_name":{"en":"Anticancer Research","ja":"Anticancer Research"},"volume":"Vol.38","number":"No.7","starting_page":"4319","ending_page":"4325","languages":["eng"],"referee":true,"identifiers":{"doi":["10.21873/anticanres.12731"],"issn":["1791-7530"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:12, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401627"},"force":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/115749","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/29228148","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-85056596012&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=340526","label":"url"}],"paper_title":{"en":"Rapid screening method for detecting highly pathogenic Streptococcus intermedius strains carrying a mutation in the lacR gene.","ja":"Rapid screening method for detecting highly pathogenic Streptococcus intermedius strains carrying a mutation in the lacR gene."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Matoba, Masaki"},{"name":"Takao, Ayuko"},{"name":"Tabata Atsushi"},{"name":"Whiley, Robert. A"},{"name":"Maeda, Nobuko"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"的場 正樹"},{"name":"高尾 亞由子"},{"name":"田端 厚之"},{"name":"Whiley, Robert. A"},{"name":"前田 伸子"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus intermedius is a member of the normal human commensal flora and secretes a human-specific cytolysin intermedilysin (ILY) as a major virulence factor. Expression of ily is repressed by LacR and loss-of-function mutations of LacR are observed in many ILY high-producing strains isolated from deep-seated abscesses, suggesting that high ILY production is necessary for increased virulence. However, because ILY exhibits no β-hemolysis on animal blood agar plates, differentiating ILY high- and low-producing strains using conventional laboratory methods is not possible. Interestingly, S. intermedius also produces glycosidases, including MsgA and NanA, which exhibit N-acetyl-β-d-glucosaminidase and neuraminidase activities, respectively. Moreover, MsgA expression, but not NanA, is negatively regulated by LacR. Here we measured the activities of MsgA, NanA and ILY in strains isolated from clinical specimens and dental plaque to determine the correlation between these glycosidase activities and ILY hemolytic activity. Hemolytic activity showed a strong positive correlation with MsgA and a weak negative correlation with NanA activities. Therefore, we calculated the ratio of MsgA and NanA activity (M/N ratio). This value showed a stronger positive correlation (r = 0.81) with ILY hemolytic activity and many strains with high M/N ratios (>2) were ILY-high producers with loss-of-function mutations in LacR.","ja":"Streptococcus intermedius is a member of the normal human commensal flora and secretes a human-specific cytolysin intermedilysin (ILY) as a major virulence factor. Expression of ily is repressed by LacR and loss-of-function mutations of LacR are observed in many ILY high-producing strains isolated from deep-seated abscesses, suggesting that high ILY production is necessary for increased virulence. However, because ILY exhibits no β-hemolysis on animal blood agar plates, differentiating ILY high- and low-producing strains using conventional laboratory methods is not possible. Interestingly, S. intermedius also produces glycosidases, including MsgA and NanA, which exhibit N-acetyl-β-d-glucosaminidase and neuraminidase activities, respectively. Moreover, MsgA expression, but not NanA, is negatively regulated by LacR. Here we measured the activities of MsgA, NanA and ILY in strains isolated from clinical specimens and dental plaque to determine the correlation between these glycosidase activities and ILY hemolytic activity. Hemolytic activity showed a strong positive correlation with MsgA and a weak negative correlation with NanA activities. Therefore, we calculated the ratio of MsgA and NanA activity (M/N ratio). This value showed a stronger positive correlation (r = 0.81) with ILY hemolytic activity and many strains with high M/N ratios (>2) were ILY-high producers with loss-of-function mutations in LacR."},"publication_date":"2018-02-01","publication_name":{"en":"FEMS Microbiology Letters","ja":"FEMS Microbiology Letters"},"volume":"Vol.365","number":"No.3","starting_page":"fnx","ending_page":"258","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1093/femsle/fnx258"],"issn":["1574-6968"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:13, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/29355570","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-85041495681&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=340580","label":"url"}],"paper_title":{"en":"A novel plasmid, pSAA0430-08, from Streptococcus anginosus subsp. anginosus strain 0430-08","ja":"A novel plasmid, pSAA0430-08, from Streptococcus anginosus subsp. anginosus strain 0430-08"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Deutsch, Douglas"},{"name":"Otsuka, Seiya"},{"name":"Verratti, Kathleen"},{"name":"Tomoyasu Toshifumi"},{"name":"Nagamune Hideaki"},{"name":"Fischetti, Vincent A."}],"ja":[{"name":"田端 厚之"},{"name":"Deutsch, Douglas"},{"name":"大塚 誠也"},{"name":"Verratti, Kathleen"},{"name":"友安 俊文"},{"name":"長宗 秀明"},{"name":"Fischetti, Vincent A."}]},"description":{"en":"Mobile genetic elements (MGEs) are the genetic material often involved in the interspecies and intraspecies genetic transduction in bacteria. However, little is known about MGEs in the Anginosus group of streptococci (AGS), one of the streptococcal groups found in the oral cavity of humans. We looked for the presence of MGEs in Streptococcus anginosus subsp. anginosus (SAA), a representative species belonging to AGS, and found a novel plasmid from SAA strain 0430-08. This plasmid was 7038bp and ~31% G/C content which we named pSAA0430-08, and examined its genetic structure and characteristics. Open reading frame (ORF) prediction revealed that pSAA0430-08 was composed of 10 ORFs including a putative plasmid replication protein (ORF1) and a putative toxin-antitoxin system (ORF9 and ORF10). Between ORF10 and ORF 1, four tandem repeats of 22bp each, generally termed as iteron, were also observed. Using variant plasmids of pSAA0430-08, we confirmed that both ORF1 and iteron were necessary for replication in host cells. Interestingly, the region from ORF4 to ORF7 showed homology with a genomic DNA segment of S. gordonii strains. Thus, this plasmid may travel between the different species in Streptococci, i.e., S. gordonii and S. anginosus.","ja":"Mobile genetic elements (MGEs) are the genetic material often involved in the interspecies and intraspecies genetic transduction in bacteria. However, little is known about MGEs in the Anginosus group of streptococci (AGS), one of the streptococcal groups found in the oral cavity of humans. We looked for the presence of MGEs in Streptococcus anginosus subsp. anginosus (SAA), a representative species belonging to AGS, and found a novel plasmid from SAA strain 0430-08. This plasmid was 7038bp and ~31% G/C content which we named pSAA0430-08, and examined its genetic structure and characteristics. Open reading frame (ORF) prediction revealed that pSAA0430-08 was composed of 10 ORFs including a putative plasmid replication protein (ORF1) and a putative toxin-antitoxin system (ORF9 and ORF10). Between ORF10 and ORF 1, four tandem repeats of 22bp each, generally termed as iteron, were also observed. Using variant plasmids of pSAA0430-08, we confirmed that both ORF1 and iteron were necessary for replication in host cells. Interestingly, the region from ORF4 to ORF7 showed homology with a genomic DNA segment of S. gordonii strains. Thus, this plasmid may travel between the different species in Streptococci, i.e., S. gordonii and S. anginosus."},"publication_date":"2018-01-11","publication_name":{"en":"Plasmid","ja":"Plasmid"},"volume":"Vol.95","number":"No.1","starting_page":"16","ending_page":"27","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1016/j.plasmid.2018.01.002"],"issn":["1095-9890"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:14, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401628"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/28607101","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-85027524694&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334638","label":"url"}],"paper_title":{"en":"Positive- and Negative-Control Pathways by Blood Components for Intermedilysin Production in Streptococcus intermedius.","ja":"Positive- and Negative-Control Pathways by Blood Components for Intermedilysin Production in Streptococcus intermedius."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Yamasaki Takahiro"},{"name":"Chiba Shinya"},{"name":"Kusaka Shingo"},{"name":"Tabata Atsushi"},{"name":"Whiley A. Robert"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"山崎 貴大"},{"name":"千葉 真也"},{"name":"日下 信吾"},{"name":"田端 厚之"},{"name":"Whiley A. Robert"},{"name":"長宗 秀明"}]},"description":{"en":"is an opportunistic bacterial pathogen secreting a human-specific cytolysin called intermedilysin (ILY) as a major pathogenic factor. This bacterium can degrade glycans into monosaccharides using two glycosidases, multisubstrate glycosidase A (MsgA) and neuraminidase (NanA). Here, we detected a stronger hemolytic activity mediated by ILY when PC574 was cultured in fetal bovine serum (FBS) than when it was grown in the standard culture medium. FBS-cultured cells also showed higher MsgA and NanA activity, although overproduction of ILY in FBS was undetectable in mutants -null and -null. Addition of purified MsgA and NanA to the FBS resulted in a release of 2.8 mM galactose and 4.3 mM -acetylneuraminic acid; these sugar concentrations were sufficient to upregulate the expression of ILY, MsgA, and NanA. Conversely, when strain PC574 was cultured in human plasma, no similar increase in hemolytic activity was observed. Moreover, addition of human plasma to the culture in FBS appeared to inhibit the stimulatory effect of FBS on ILY, MsgA, and NanA, although there were individual differences among the plasma samples. We confirmed that human plasma contains immunoglobulins that can neutralize ILY, MsgA, and NanA activities. In addition, human plasma had a neutralizing effect on cytotoxicity of toward HepG2 cells in FBS, and a higher concentration of human plasma was necessary to reduce the cytotoxicity of an ILY-high-producing strain than an ILY-low-producing strain. Overall, our data show that blood contains factors that stimulate and inhibit ILY expression and activity, which may affect pathogenicity of .","ja":"is an opportunistic bacterial pathogen secreting a human-specific cytolysin called intermedilysin (ILY) as a major pathogenic factor. This bacterium can degrade glycans into monosaccharides using two glycosidases, multisubstrate glycosidase A (MsgA) and neuraminidase (NanA). Here, we detected a stronger hemolytic activity mediated by ILY when PC574 was cultured in fetal bovine serum (FBS) than when it was grown in the standard culture medium. FBS-cultured cells also showed higher MsgA and NanA activity, although overproduction of ILY in FBS was undetectable in mutants -null and -null. Addition of purified MsgA and NanA to the FBS resulted in a release of 2.8 mM galactose and 4.3 mM -acetylneuraminic acid; these sugar concentrations were sufficient to upregulate the expression of ILY, MsgA, and NanA. Conversely, when strain PC574 was cultured in human plasma, no similar increase in hemolytic activity was observed. Moreover, addition of human plasma to the culture in FBS appeared to inhibit the stimulatory effect of FBS on ILY, MsgA, and NanA, although there were individual differences among the plasma samples. We confirmed that human plasma contains immunoglobulins that can neutralize ILY, MsgA, and NanA activities. In addition, human plasma had a neutralizing effect on cytotoxicity of toward HepG2 cells in FBS, and a higher concentration of human plasma was necessary to reduce the cytotoxicity of an ILY-high-producing strain than an ILY-low-producing strain. Overall, our data show that blood contains factors that stimulate and inhibit ILY expression and activity, which may affect pathogenicity of ."},"publication_date":"2017-08-18","publication_name":{"en":"Infection and Immunity","ja":"Infection and Immunity"},"volume":"Vol.85","number":"No.9","starting_page":"1","ending_page":"17","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/IAI.00379-17"],"issn":["1098-5522"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:15, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401629"},"force":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/117781","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/26168480","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-84939824857&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=307792","label":"url"}],"paper_title":{"en":"Development of a Sortase A-mediated Peptide-labeled Liposome Applicable to Drug-delivery Systems","ja":"Development of a Sortase A-mediated Peptide-labeled Liposome Applicable to Drug-delivery Systems"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Yukihisa Ohkubo"},{"name":"Anyhoji Natsuki"},{"name":"Hojo Keiko"},{"name":"Tomoyasu Toshifumi"},{"name":"Tatematsu Youhei"},{"name":"Ohkura Kazuto"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"大久保 行将"},{"name":"安養寺 夏希"},{"name":"北條 恵子"},{"name":"友安 俊文"},{"name":"立松 洋平"},{"name":"大倉 一人"},{"name":"長宗 秀明"}]},"description":{"en":"In order to develop an efficient drug-delivery system (DDS), a lipopeptide-loaded liposome that functions as a platform for the transpeptidase reaction mediated by sortase A (SrtA) was constructed and its stability, as well as cell-specific targeting were evaluated in the present study. Several lipopeptides possessing an acceptor peptide sequence (oligoglycine ≥ three residues) or donor peptide sequence (LPETG) for the SrtA-mediated reaction were chemically synthesized and then inserted into the liposome membrane composed of 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) and cholesterol (DPPC-Chol-lipo) to obtain the lipopeptide-loaded liposomes. The transpeptidase reaction mediated by recombinant SrtA (His-ΔN59SrtA) was employed to modify the peptide moiety on the liposomal surface using a fluorescently-labeled substrate peptide corresponding to the species of each loaded lipopeptide. Furthermore, lung tumor-binding peptide (LTBP)-labeled liposomes, prepared by this transpeptidase reaction, were investigated for selective targeting to lung cancer cells in vitro. The His-ΔN59SrtA-mediated transpeptidation of fluorescently-labeled peptide on the lipopeptide-loaded DPPC-Chol-lipo was confirmed. The selective targeting of LTBP-labeled liposomes to the lung cancer cell line A549 was also observed in vitro. These results suggest that the labeling of acceptor or donor lipopeptide-loaded liposomes with the transpeptidase SrtA could be a useful method for developing a platform applicable to a cancer-targeting DDS.","ja":"In order to develop an efficient drug-delivery system (DDS), a lipopeptide-loaded liposome that functions as a platform for the transpeptidase reaction mediated by sortase A (SrtA) was constructed and its stability, as well as cell-specific targeting were evaluated in the present study. Several lipopeptides possessing an acceptor peptide sequence (oligoglycine ≥ three residues) or donor peptide sequence (LPETG) for the SrtA-mediated reaction were chemically synthesized and then inserted into the liposome membrane composed of 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) and cholesterol (DPPC-Chol-lipo) to obtain the lipopeptide-loaded liposomes. The transpeptidase reaction mediated by recombinant SrtA (His-ΔN59SrtA) was employed to modify the peptide moiety on the liposomal surface using a fluorescently-labeled substrate peptide corresponding to the species of each loaded lipopeptide. Furthermore, lung tumor-binding peptide (LTBP)-labeled liposomes, prepared by this transpeptidase reaction, were investigated for selective targeting to lung cancer cells in vitro. The His-ΔN59SrtA-mediated transpeptidation of fluorescently-labeled peptide on the lipopeptide-loaded DPPC-Chol-lipo was confirmed. The selective targeting of LTBP-labeled liposomes to the lung cancer cell line A549 was also observed in vitro. These results suggest that the labeling of acceptor or donor lipopeptide-loaded liposomes with the transpeptidase SrtA could be a useful method for developing a platform applicable to a cancer-targeting DDS."},"publication_date":"2015-08","publication_name":{"en":"Anticancer Research","ja":"Anticancer Research"},"volume":"Vol.35","number":"No.8","starting_page":"4411","ending_page":"4417","languages":["eng"],"referee":true,"identifiers":{"issn":["1791-7530"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:16, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401630"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/24557631","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-84893948353&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=290332","label":"url"}],"paper_title":{"en":"Estrogen stimuli promote osteoblastic differentiation via the subtilisin-like proprotein convertase PACE4 in MC3T3-E1 cells.","ja":"Estrogen stimuli promote osteoblastic differentiation via the subtilisin-like proprotein convertase PACE4 in MC3T3-E1 cells."},"authors":{"en":[{"name":"Hyejin Kim"},{"name":"Tabata Atsushi"},{"name":"Tomoyasu Toshifumi"},{"name":"Tomomi Ueno"},{"name":"Shigeto Uchiyama"},{"name":"Yuasa Keizo"},{"name":"Tsuji Akihiko"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"金 惠珍"},{"name":"田端 厚之"},{"name":"友安 俊文"},{"name":"Tomomi Ueno"},{"name":"Shigeto Uchiyama"},{"name":"湯浅 恵造"},{"name":"辻 明彦"},{"name":"長宗 秀明"}]},"description":{"en":"Estrogenic compounds include endogenous estrogens such as estradiol as well as soybean isoflavones, such as daidzein and its metabolite equol, which are known phytoestrogens that prevent osteoporosis in postmenopausal women. Indeed, mineralization of MC3T3-E1 cells, a murine osteoblastic cell line, was significantly decreased in medium containing fetal bovine serum treated with charcoal-dextran to deplete endogenous estrogens, but estradiol and these soybean isoflavones dose-dependently restored the differentiation of MC3T3-E1 cells; equal was tenfold more effective than daidzein. These differentiation promoting effects were inhibited by the addition of fulvestrant, which is a selective downregulator of estrogen receptors. Analysis of the expression pattern of bone-related genes by reverse transcription PCR (RT-PCR)/quantitative real-time PCR (qRT-PCR), which focused on responsiveness to the estrogen stimuli, revealed that the transcription of PACE4, a subtilisin-like proprotein convertase, was tightly linked with the differentiation of MC3T3-E1 cells induced by estrogen stimuli. Moreover, treatment with RNAi of PACE4 in MC3T3-E1 cells resulted in a drastic decrease of mineralization in the presence of estrogen stimuli. These results strongly suggest that PACE4 participates in bone formation at least in osteoblast differentiation, and estrogen receptor-mediated stimuli induce osteoblast differentiation through the upregulation of PACE4 expression.","ja":"Estrogenic compounds include endogenous estrogens such as estradiol as well as soybean isoflavones, such as daidzein and its metabolite equol, which are known phytoestrogens that prevent osteoporosis in postmenopausal women. Indeed, mineralization of MC3T3-E1 cells, a murine osteoblastic cell line, was significantly decreased in medium containing fetal bovine serum treated with charcoal-dextran to deplete endogenous estrogens, but estradiol and these soybean isoflavones dose-dependently restored the differentiation of MC3T3-E1 cells; equal was tenfold more effective than daidzein. These differentiation promoting effects were inhibited by the addition of fulvestrant, which is a selective downregulator of estrogen receptors. Analysis of the expression pattern of bone-related genes by reverse transcription PCR (RT-PCR)/quantitative real-time PCR (qRT-PCR), which focused on responsiveness to the estrogen stimuli, revealed that the transcription of PACE4, a subtilisin-like proprotein convertase, was tightly linked with the differentiation of MC3T3-E1 cells induced by estrogen stimuli. Moreover, treatment with RNAi of PACE4 in MC3T3-E1 cells resulted in a drastic decrease of mineralization in the presence of estrogen stimuli. These results strongly suggest that PACE4 participates in bone formation at least in osteoblast differentiation, and estrogen receptor-mediated stimuli induce osteoblast differentiation through the upregulation of PACE4 expression."},"publication_date":"2015-01","publication_name":{"en":"Journal of Bone and Mineral Metabolism","ja":"Journal of Bone and Mineral Metabolism"},"volume":"Vol.33","number":"No.1","starting_page":"30","ending_page":"39","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1007/s00774-014-0567-9"],"issn":["1435-5604"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:17, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401631"},"force":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/117782","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/25075095","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-84908660909&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=282412","label":"url"}],"paper_title":{"en":"Investigation on the Reaction Conditions of Staphylococcus aureus Sortase A for Creating Surface-modified Liposomes as a Drug-delivery System Tool","ja":"Investigation on the Reaction Conditions of Staphylococcus aureus Sortase A for Creating Surface-modified Liposomes as a Drug-delivery System Tool"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Anyoji Natsuki"},{"name":"Ohkubo Yukimasa"},{"name":"Tomoyasu Toshifumi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"安養寺 夏希"},{"name":"大久保 行将"},{"name":"友安 俊文"},{"name":"長宗 秀明"}]},"description":{"en":"This study aimed to determine the preferred conditions for the transpeptidase reaction of sortase A from Staphylococcus aureus, for the purpose of creating functional liposomes useful for a drug-delivery system (DDS). His-tagged recombinant sortase A with 59 amino acids deleted from the N-terminus (His-ΔN59SrtA) was prepared using an Escherichia coli expression system. The pH dependency and sorting signal sequence dependency of the transpeptidase reaction of His-ΔN59SrtA were analyzed by monitoring the transfer of model donor-substrates (i.e. His-tagged mutant green fluorescent proteins with a C-terminal LPxTG sorting signal) to model acceptor-beads with a GGGGGC peptide. In addition, using preferred conditions, the sortase A reaction was used to modify liposome surface. The transpeptidase reaction of His-ΔN59SrtA was enhanced under weakly acidic conditions. Transfer efficiency, based on sorting signal recognition by His-ΔN59SrtA, was similar to or higher than that obtained using several substrates with amino acids other than Glu in the sorting signal position \"x\". Furthermore, liposomes containing GGGGGC peptide-linked dipalmitoylphosphatidylethanolamine were successfully modified using the preferred conditions for His-ΔN59SrtA determined in this study. Preferred conditions for the transpeptidase reaction of His-ΔN59SrtA, especially in a weakly acidic environment to enhance reaction, was established and successfully used to create functional liposomes applicable to DDS.","ja":"This study aimed to determine the preferred conditions for the transpeptidase reaction of sortase A from Staphylococcus aureus, for the purpose of creating functional liposomes useful for a drug-delivery system (DDS). His-tagged recombinant sortase A with 59 amino acids deleted from the N-terminus (His-ΔN59SrtA) was prepared using an Escherichia coli expression system. The pH dependency and sorting signal sequence dependency of the transpeptidase reaction of His-ΔN59SrtA were analyzed by monitoring the transfer of model donor-substrates (i.e. His-tagged mutant green fluorescent proteins with a C-terminal LPxTG sorting signal) to model acceptor-beads with a GGGGGC peptide. In addition, using preferred conditions, the sortase A reaction was used to modify liposome surface. The transpeptidase reaction of His-ΔN59SrtA was enhanced under weakly acidic conditions. Transfer efficiency, based on sorting signal recognition by His-ΔN59SrtA, was similar to or higher than that obtained using several substrates with amino acids other than Glu in the sorting signal position \"x\". Furthermore, liposomes containing GGGGGC peptide-linked dipalmitoylphosphatidylethanolamine were successfully modified using the preferred conditions for His-ΔN59SrtA determined in this study. Preferred conditions for the transpeptidase reaction of His-ΔN59SrtA, especially in a weakly acidic environment to enhance reaction, was established and successfully used to create functional liposomes applicable to DDS."},"publication_date":"2014-08","publication_name":{"en":"Anticancer Research","ja":"Anticancer Research"},"volume":"Vol.34","number":"No.8","starting_page":"4521","ending_page":"4527","languages":["eng"],"referee":true,"identifiers":{"issn":["1791-7530"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:18, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401632"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/24858187","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-84903904703&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=282346","label":"url"}],"paper_title":{"en":"Identification and Characterization of a Novel Secreted Glycosidase with Multiple Glycosidase Activities in Streptococcus intermedius","ja":"Identification and Characterization of a Novel Secreted Glycosidase with Multiple Glycosidase Activities in Streptococcus intermedius"},"authors":{"en":[{"name":"Imaki Hidenori"},{"name":"Tomoyasu Toshifumi"},{"name":"Yamamoto Naoki"},{"name":"Taue Chiharu"},{"name":"Masuda Sachiko"},{"name":"Takao Ayuko"},{"name":"Maeda Nobuko"},{"name":"Tabata Atsushi"},{"name":"Whiley A. Robert"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"今木 英統"},{"name":"友安 俊文"},{"name":"山本 直輝"},{"name":"田上 千遥"},{"name":"増田 早智子"},{"name":"Takao Ayuko"},{"name":"Maeda Nobuko"},{"name":"田端 厚之"},{"name":"Whiley A. Robert"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus intermedius is a known human pathogen and belongs to the anginosus group (S. anginosus, S. intermedius, and S. constellatus) of streptococci (AGS). We found a large open reading frame (6,708 bp) in the lac operon, and bioinformatic analysis suggested that this gene encodes a novel glycosidase that can exhibit β-d-galactosidase and N-acetyl-β-d-hexosaminidase activities. We, therefore, named this protein \"multisubstrate glycosidase A\" (MsgA). To test whether MsgA has these glycosidase activities, the msgA gene was disrupted in S. intermedius. The msgA-deficient mutant no longer showed cell- and supernatant-associated β-d-galactosidase, β-d-fucosidase, N-acetyl-β-d-glucosaminidase, and N-acetyl-β-d-galactosaminidase activities, and all phenotypes were complemented in trans with a recombinant plasmid carrying msgA. Purified MsgA had all four of these glycosidase activities and exhibited the lowest Km with 4-methylumbelliferyl-linked N-acetyl-β-d-glucosaminide and the highest kcat with 4-methylumbelliferyl-linked β-d-galactopyranoside. In addition, the purified LacZ domain of MsgA had β-d-galactosidase and β-d-fucosidase activities, and the GH20 domain exhibited both N-acetyl-β-d-glucosaminidase and N-acetyl-β-d-galactosaminidase activities. The β-d-galactosidase and β-d-fucosidase activities of MsgA are thermolabile, and the optimal temperature of the reaction was 40°C, whereas almost all enzymatic activities disappeared at 49°C. The optimal temperatures for the N-acetyl-β-d-glucosaminidase and N-acetyl-β-d-galactosaminidase activities were 58 and 55°C, respectively. The requirement of sialidase treatment to remove sialic acid residues of the glycan branch end for glycan degradation by MsgA on human α1-antitrypsin indicates that MsgA has exoglycosidase activities. MsgA and sialidase might have an important function in the production and utilization of monosaccharides from oligosaccharides, such as glycans for survival in a normal habitat and for pathogenicity of S. intermedius.","ja":"Streptococcus intermedius is a known human pathogen and belongs to the anginosus group (S. anginosus, S. intermedius, and S. constellatus) of streptococci (AGS). We found a large open reading frame (6,708 bp) in the lac operon, and bioinformatic analysis suggested that this gene encodes a novel glycosidase that can exhibit β-d-galactosidase and N-acetyl-β-d-hexosaminidase activities. We, therefore, named this protein \"multisubstrate glycosidase A\" (MsgA). To test whether MsgA has these glycosidase activities, the msgA gene was disrupted in S. intermedius. The msgA-deficient mutant no longer showed cell- and supernatant-associated β-d-galactosidase, β-d-fucosidase, N-acetyl-β-d-glucosaminidase, and N-acetyl-β-d-galactosaminidase activities, and all phenotypes were complemented in trans with a recombinant plasmid carrying msgA. Purified MsgA had all four of these glycosidase activities and exhibited the lowest Km with 4-methylumbelliferyl-linked N-acetyl-β-d-glucosaminide and the highest kcat with 4-methylumbelliferyl-linked β-d-galactopyranoside. In addition, the purified LacZ domain of MsgA had β-d-galactosidase and β-d-fucosidase activities, and the GH20 domain exhibited both N-acetyl-β-d-glucosaminidase and N-acetyl-β-d-galactosaminidase activities. The β-d-galactosidase and β-d-fucosidase activities of MsgA are thermolabile, and the optimal temperature of the reaction was 40°C, whereas almost all enzymatic activities disappeared at 49°C. The optimal temperatures for the N-acetyl-β-d-glucosaminidase and N-acetyl-β-d-galactosaminidase activities were 58 and 55°C, respectively. The requirement of sialidase treatment to remove sialic acid residues of the glycan branch end for glycan degradation by MsgA on human α1-antitrypsin indicates that MsgA has exoglycosidase activities. MsgA and sialidase might have an important function in the production and utilization of monosaccharides from oligosaccharides, such as glycans for survival in a normal habitat and for pathogenicity of S. intermedius."},"publication_date":"2014-08","publication_name":{"en":"Journal of Bacteriology","ja":"Journal of Bacteriology"},"volume":"Vol.196","number":"No.15","starting_page":"2817","ending_page":"2826","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/JB.01727-14"],"issn":["1098-5530"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:19, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401633"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/24600025","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=282343","label":"url"}],"paper_title":{"en":"A streptolysin S homologue is essential for beta-haemolytic Streptococcus constellatus subsp. constellatus cytotoxicit","ja":"A streptolysin S homologue is essential for beta-haemolytic Streptococcus constellatus subsp. constellatus cytotoxicit"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Sato Yuji"},{"name":"Maya Kentaro"},{"name":"Nakano Kota"},{"name":"Kikuchi Ken"},{"name":"Whiley A. Robert"},{"name":"Ohkura Kazuto"},{"name":"Tomoyasu Toshifumi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"佐藤 裕士"},{"name":"眞屋 健太朗"},{"name":"中野 晃太"},{"name":"Kikuchi Ken"},{"name":"Whiley A. Robert"},{"name":"大倉 一人"},{"name":"友安 俊文"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus constellatus is a member of the Anginosus group streptococci (AGS) and primarily inhabits the human oral cavity. S. constellatus is composed of three subspecies: S. constellatus subsp. constellatus (SCC), S. constellatus subsp. pharyngis and the newly described subspecies S. constellatus subsp. viborgensis. Although previous studies have established that SCC contains β-haemolytic strains, the factor(s) responsible for β-haemolysis in β-haemolytic SCC (β-SCC) has yet to be clarified. Recently, we discovered that a streptolysin S (SLS) homologue is the β-haemolytic factor of β-haemolytic Streptococcus anginosus subsp. anginosus (β-SAA), another member of the AGS. Furthermore, because previous studies have suggested that other AGS species, except for Streptococcus intermedius, do not possess a haemolysin(s) belonging to the family of cholesterol-dependent cytolysins, we hypothesized that, as with β-SAA, the SLS homologue is the β-haemolytic factor of β-SCC, and therefore aimed to investigate and characterize the haemolytic factor of β-SCC in the present study. PCR amplification revealed that all of the tested β-SCC strains were positive for the sagA homologue of SCC (sagA(SCC)). Further investigations using β-SCC strain W277 were conducted to elucidate the relationship between sagA(SCC) and β-haemolysis by constructing sagA(SCC) deletion mutants, which completely lost β-haemolytic activity. This loss of β-haemolytic activity was restored by trans-complementation of sagA(SCC). Furthermore, a co-cultivation assay established that the cytotoxicity of β-SCC was clearly dependent on the presence of sagA(SCC). These results demonstrate that sagA(SCC) is the factor responsible for β-SCC β-haemolysis and cytotoxicity.","ja":"Streptococcus constellatus is a member of the Anginosus group streptococci (AGS) and primarily inhabits the human oral cavity. S. constellatus is composed of three subspecies: S. constellatus subsp. constellatus (SCC), S. constellatus subsp. pharyngis and the newly described subspecies S. constellatus subsp. viborgensis. Although previous studies have established that SCC contains β-haemolytic strains, the factor(s) responsible for β-haemolysis in β-haemolytic SCC (β-SCC) has yet to be clarified. Recently, we discovered that a streptolysin S (SLS) homologue is the β-haemolytic factor of β-haemolytic Streptococcus anginosus subsp. anginosus (β-SAA), another member of the AGS. Furthermore, because previous studies have suggested that other AGS species, except for Streptococcus intermedius, do not possess a haemolysin(s) belonging to the family of cholesterol-dependent cytolysins, we hypothesized that, as with β-SAA, the SLS homologue is the β-haemolytic factor of β-SCC, and therefore aimed to investigate and characterize the haemolytic factor of β-SCC in the present study. PCR amplification revealed that all of the tested β-SCC strains were positive for the sagA homologue of SCC (sagA(SCC)). Further investigations using β-SCC strain W277 were conducted to elucidate the relationship between sagA(SCC) and β-haemolysis by constructing sagA(SCC) deletion mutants, which completely lost β-haemolytic activity. This loss of β-haemolytic activity was restored by trans-complementation of sagA(SCC). Furthermore, a co-cultivation assay established that the cytotoxicity of β-SCC was clearly dependent on the presence of sagA(SCC). These results demonstrate that sagA(SCC) is the factor responsible for β-SCC β-haemolysis and cytotoxicity."},"publication_date":"2014-05","publication_name":{"en":"Microbiology","ja":"Microbiology"},"volume":"Vol.160","number":"No.5","starting_page":"980","ending_page":"991","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1099/mic.0.075580-0"],"issn":["1465-2080"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:20, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"http://ci.nii.ac.jp/naid/40020034557/","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/24401114","label":"url"},{"@id":"https://cir.nii.ac.jp/crid/1520291853530158464/","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-84895562361&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=282340","label":"url"}],"paper_title":{"en":"The diversity of receptor recognition in cholesterol-dependent cytolysins","ja":"The diversity of receptor recognition in cholesterol-dependent cytolysins"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Ohkura Kazuto"},{"name":"Yukimasa Ohkubo"},{"name":"Tomoyasu Toshifumi"},{"name":"Hisashi Ohkuni"},{"name":"Robert A. Whiley"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"大倉 一人"},{"name":"大久保 行将"},{"name":"友安 俊文"},{"name":"Hisashi Ohkuni"},{"name":"Robert A. Whiley"},{"name":"長宗 秀明"}]},"description":{"en":"Cholesterol-dependent cytolysins (CDCs) are bacterial pore-forming toxins secreted mainly by pathogenic Gram-positive bacteria. CDCs generally recognize and bind to membrane cholesterol to create pores and lyse target cells. However, in contrast to typical CDCs such as streptolysin O, several atypical CDCs have been reported. The first of these was intermedilysin, which is secreted by Streptococcus intermedius and has human cell-specificity, human CD59 (huCD59) being its receptor. In the study reported here, the diversity of receptor recognition among CDCs was investigated and multi-receptor recognition characteristics were identified within this toxin family. Streptococcus mitis-derived human platelet aggregation factor (Sm-hPAF) secreted by S. mitis strain Nm-65 isolated from a patient with Kawasaki disease was previously shown to hemolyze erythrocytes in a species-dependent manner, its maximum activity being in human cells. In the present study, it was found that Sm-hPAF recognizes both membrane cholesterol and huCD59 as receptors for triggering pore-formation. Moreover, vaginolysin (VLY) of Gardnerella vaginalis showed similar characteristics to Sm-hPAF regarding receptor recognition. On the basis of the results presented here, the mode of receptor recognition of CDCs can be categorized into the following three groups: (i) Group I, comprising typical CDCs with high affinity to cholesterol and no or very little affinity to huCD59; (ii) Group II, including atypical CDCs such as ILY, with no or very little affinity to cholesterol and high affinity to huCD59; and (iii) Group III, which contains atypical CDCs such as Sm-hPAF and VLY with affinity to both cholesterol and huCD59.","ja":"Cholesterol-dependent cytolysins (CDCs) are bacterial pore-forming toxins secreted mainly by pathogenic Gram-positive bacteria. CDCs generally recognize and bind to membrane cholesterol to create pores and lyse target cells. However, in contrast to typical CDCs such as streptolysin O, several atypical CDCs have been reported. The first of these was intermedilysin, which is secreted by Streptococcus intermedius and has human cell-specificity, human CD59 (huCD59) being its receptor. In the study reported here, the diversity of receptor recognition among CDCs was investigated and multi-receptor recognition characteristics were identified within this toxin family. Streptococcus mitis-derived human platelet aggregation factor (Sm-hPAF) secreted by S. mitis strain Nm-65 isolated from a patient with Kawasaki disease was previously shown to hemolyze erythrocytes in a species-dependent manner, its maximum activity being in human cells. In the present study, it was found that Sm-hPAF recognizes both membrane cholesterol and huCD59 as receptors for triggering pore-formation. Moreover, vaginolysin (VLY) of Gardnerella vaginalis showed similar characteristics to Sm-hPAF regarding receptor recognition. On the basis of the results presented here, the mode of receptor recognition of CDCs can be categorized into the following three groups: (i) Group I, comprising typical CDCs with high affinity to cholesterol and no or very little affinity to huCD59; (ii) Group II, including atypical CDCs such as ILY, with no or very little affinity to cholesterol and high affinity to huCD59; and (iii) Group III, which contains atypical CDCs such as Sm-hPAF and VLY with affinity to both cholesterol and huCD59."},"publication_date":"2014-03","publication_name":{"en":"Microbiology and Immunology","ja":"Microbiology and Immunology"},"volume":"Vol.58","number":"No.3","starting_page":"155","ending_page":"171","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1111/1348-0421.12131"],"issn":["0385-5600"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:21, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401634"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/23798532","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-84884217618&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=275384","label":"url"}],"paper_title":{"en":"LacR mutations are frequently observed in Streptococcus intermedius and are responsible for increased intermedilysin production and virulence.","ja":"LacR mutations are frequently observed in Streptococcus intermedius and are responsible for increased intermedilysin production and virulence."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Imaki Hidenori"},{"name":"Masuda Sachiko"},{"name":"Okamoto Ayumi"},{"name":"Kim HyeJin"},{"name":"Waite Richard"},{"name":"Whiley Robert"},{"name":"Kikuchi Ken"},{"name":"Hiramatsu Keiichi"},{"name":"Tabata Atsushi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"今木 英統"},{"name":"増田 早智子"},{"name":"岡本 歩"},{"name":"金 惠珍"},{"name":"Waite Richard"},{"name":"Whiley Robert"},{"name":"菊池 賢"},{"name":"平松 啓一"},{"name":"田端 厚之"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus intermedius secretes a human-specific cytolysin, intermedilysin (ILY), which is considered to be the major virulence factor of this pathogen. We screened for a repressor of ily expression by using random gene disruption in a low-ILY-producing strain (PC574). Three independent high-ILY-producing colonies that had plasmid insertions within a gene that has high homology to lacR were isolated. Validation of these observations was achieved through disruption of lacR in strain PC574 with an erythromycin cassette, which also led to higher hemolytic activity, increased transcription of ily, and higher cytotoxicity against HepG2 cells, compared to the parental strain. The direct binding of LacR within the ily promoter region was shown by a biotinylated DNA probe pulldown assay, and the amount of ILY secreted into the culture supernatant by PC574 cells was increased by adding lactose or galactose to the medium as a carbon source. Furthermore, we examined lacR nucleotide sequences and the hemolytic activity of 50 strains isolated from clinical infections and 7 strains isolated from dental plaque. Of the 50 strains isolated from infections, 13 showed high ILY production, 11 of these 13 strains had one or more point mutations and/or an insertion mutation in LacR, and almost all mutations were associated with a marked decline in LacR function. These results strongly suggest that mutation in lacR is required for the overproduction of ILY, which is associated with an increase in pathogenicity of S. intermedius.","ja":"Streptococcus intermedius secretes a human-specific cytolysin, intermedilysin (ILY), which is considered to be the major virulence factor of this pathogen. We screened for a repressor of ily expression by using random gene disruption in a low-ILY-producing strain (PC574). Three independent high-ILY-producing colonies that had plasmid insertions within a gene that has high homology to lacR were isolated. Validation of these observations was achieved through disruption of lacR in strain PC574 with an erythromycin cassette, which also led to higher hemolytic activity, increased transcription of ily, and higher cytotoxicity against HepG2 cells, compared to the parental strain. The direct binding of LacR within the ily promoter region was shown by a biotinylated DNA probe pulldown assay, and the amount of ILY secreted into the culture supernatant by PC574 cells was increased by adding lactose or galactose to the medium as a carbon source. Furthermore, we examined lacR nucleotide sequences and the hemolytic activity of 50 strains isolated from clinical infections and 7 strains isolated from dental plaque. Of the 50 strains isolated from infections, 13 showed high ILY production, 11 of these 13 strains had one or more point mutations and/or an insertion mutation in LacR, and almost all mutations were associated with a marked decline in LacR function. These results strongly suggest that mutation in lacR is required for the overproduction of ILY, which is associated with an increase in pathogenicity of S. intermedius."},"publication_date":"2013-09","publication_name":{"en":"Infection and Immunity","ja":"Infection and Immunity"},"volume":"Vol.81","number":"No.9","starting_page":"3276","ending_page":"3286","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/IAI.00638-13"],"issn":["1098-5522"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:22, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401635"},"force":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/117783","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/23780978","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=280368","label":"url"}],"paper_title":{"en":"Construction of an improved drug delivery system tool with enhanced versatility in cell-targeting.","ja":"Construction of an improved drug delivery system tool with enhanced versatility in cell-targeting."},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Ohkubo Yukimasa"},{"name":"Tamura Masato"},{"name":"Tomoyasu Toshifumi"},{"name":"Ohkura Kazuto"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"Ohkubo Yukimasa"},{"name":"Tamura Masato"},{"name":"友安 俊文"},{"name":"大倉 一人"},{"name":"長宗 秀明"}]},"description":{"en":"His-Z-CDC(ss)(IS) was revealed to be an improved DDS tool with enhanced versatility in cell targeting.","ja":"His-Z-CDC(ss)(IS) was revealed to be an improved DDS tool with enhanced versatility in cell targeting."},"publication_date":"2013-07","publication_name":{"en":"Anticancer Research","ja":"Anticancer Research"},"volume":"Vol.33","number":"No.7","starting_page":"2905","ending_page":"2910","languages":["eng"],"referee":true,"identifiers":{"issn":["1791-7530"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:23, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401636"},"force":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/117785","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/23292771","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=260915","label":"url"}],"paper_title":{"en":"Novel Twin Streptolysin S-Like Peptides Encoded in the sag Operon Homologue of Beta-Hemolytic Streptococcus anginosus.","ja":"Novel Twin Streptolysin S-Like Peptides Encoded in the sag Operon Homologue of Beta-Hemolytic Streptococcus anginosus."},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Nakano Kota"},{"name":"Ohkura Kazuto"},{"name":"Tomoyasu Toshifumi"},{"name":"Kikuchi Ken"},{"name":"Whiley Robert"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"中野 晃太"},{"name":"大倉 一人"},{"name":"友安 俊文"},{"name":"菊池 賢"},{"name":"Whiley Robert"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus anginosus is a member of the anginosus group streptococci, which form part of the normal human oral flora. In contrast to the pyogenic group streptococci, our knowledge of the virulence factors of the anginosus group streptococci, including S. anginosus, is not sufficient to allow a clear understanding of the basis of their pathogenicity. Generally, hemolysins are thought to be important virulence factors in streptococcal infections. In the present study, a sag operon homologue was shown to be responsible for beta-hemolysis in S. anginosus strains by random gene knockout. Interestingly, contrary to pyogenic group streptococci, beta-hemolytic S. anginosus was shown to have two tandem sagA homologues, encoding streptolysin S (SLS)-like peptides, in the sag operon homologue. Gene deletion and complementation experiments revealed that both genes were functional, and these SLS-like peptides were essential for beta-hemolysis in beta-hemolytic S. anginosus. Furthermore, the amino acid sequence of these SLS-like peptides differed from that of the typical SLS of S. pyogenes, especially in their propeptide domain, and an amino acid residue indicated to be important for the cytolytic activity of SLS in S. pyogenes was deleted in both S. anginosus homologues. These data suggest that SLS-like peptides encoded by two sagA homologues in beta-hemolytic S. anginosus may be potential virulence factors with a different structure essential for hemolytic activity and/or the maturation process compared to the typical SLS present in pyogenic group streptococci.","ja":"Streptococcus anginosus is a member of the anginosus group streptococci, which form part of the normal human oral flora. In contrast to the pyogenic group streptococci, our knowledge of the virulence factors of the anginosus group streptococci, including S. anginosus, is not sufficient to allow a clear understanding of the basis of their pathogenicity. Generally, hemolysins are thought to be important virulence factors in streptococcal infections. In the present study, a sag operon homologue was shown to be responsible for beta-hemolysis in S. anginosus strains by random gene knockout. Interestingly, contrary to pyogenic group streptococci, beta-hemolytic S. anginosus was shown to have two tandem sagA homologues, encoding streptolysin S (SLS)-like peptides, in the sag operon homologue. Gene deletion and complementation experiments revealed that both genes were functional, and these SLS-like peptides were essential for beta-hemolysis in beta-hemolytic S. anginosus. Furthermore, the amino acid sequence of these SLS-like peptides differed from that of the typical SLS of S. pyogenes, especially in their propeptide domain, and an amino acid residue indicated to be important for the cytolytic activity of SLS in S. pyogenes was deleted in both S. anginosus homologues. These data suggest that SLS-like peptides encoded by two sagA homologues in beta-hemolytic S. anginosus may be potential virulence factors with a different structure essential for hemolytic activity and/or the maturation process compared to the typical SLS present in pyogenic group streptococci."},"publication_date":"2013-03","publication_name":{"en":"Journal of Bacteriology","ja":"Journal of Bacteriology"},"volume":"Vol.195","number":"No.5","starting_page":"1090","ending_page":"1099","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/JB.01344-12"],"issn":["1098-5530"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:24, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401637"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/22929984","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=260912","label":"url"}],"paper_title":{"en":"Small heat shock protein AgsA: an effective stabilizer of enzyme activities.","ja":"Small heat shock protein AgsA: an effective stabilizer of enzyme activities."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Tabata Atsushi"},{"name":"Ishikawa Yoko"},{"name":"Whiley Robert"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"田端 厚之"},{"name":"石川 洋子"},{"name":"Whiley Robert"},{"name":"長宗 秀明"}]},"description":{"en":"A small heat shock protein, AgsA, possesses chaperone activity that can reduce the amount of heat-aggregated protein in vivo, and suppress the aggregation of chemical- and heat-denatured proteins in vitro. Therefore, we examined the ability of AgsA to stabilize the activity of several enzymes by using this chaperone activity. We observed that AgsA can stabilize the enzymatic activities of Renilla (Renilla reniformis) luciferase, firefly (Photinus pyralis) luciferase, and β-galactosidase, and showed comparable or greater stabilization of these enzymes than bovine serum albumin (BSA), a well-known stabilizer of enzyme activities. In particular, AgsA revealed better stabilization of Renilla luciferase and β-galactosidase than BSA under disulfide bond-reducing conditions with dithiothreitol. In addition, AgsA also increased the enzymatic performance of β-galactosidase and various restriction enzymes to a comparable or greater extent than BSA. These data indicate that AgsA may be useful as a general stabilizer of enzyme activities.","ja":"A small heat shock protein, AgsA, possesses chaperone activity that can reduce the amount of heat-aggregated protein in vivo, and suppress the aggregation of chemical- and heat-denatured proteins in vitro. Therefore, we examined the ability of AgsA to stabilize the activity of several enzymes by using this chaperone activity. We observed that AgsA can stabilize the enzymatic activities of Renilla (Renilla reniformis) luciferase, firefly (Photinus pyralis) luciferase, and β-galactosidase, and showed comparable or greater stabilization of these enzymes than bovine serum albumin (BSA), a well-known stabilizer of enzyme activities. In particular, AgsA revealed better stabilization of Renilla luciferase and β-galactosidase than BSA under disulfide bond-reducing conditions with dithiothreitol. In addition, AgsA also increased the enzymatic performance of β-galactosidase and various restriction enzymes to a comparable or greater extent than BSA. These data indicate that AgsA may be useful as a general stabilizer of enzyme activities."},"publication_date":"2013-01","publication_name":{"en":"Journal of Bioscience and Bioengineering","ja":"Journal of Bioscience and Bioengineering"},"volume":"Vol.115","number":"No.1","starting_page":"15","ending_page":"19","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1016/j.jbiosc.2012.08.001"],"issn":["1347-4421"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:25, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401638"},"force":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/117784","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/22641669","label":"url"},{"@id":"https://www.scopus.com/record/display.url?eid=2-s2.0-84864557140&origin=inward","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=253409","label":"url"}],"paper_title":{"en":"Investigation of a Bacterial Pore-forming Chimera Toxin for Application as a Novel Drug-delivery System Tool","ja":"Investigation of a Bacterial Pore-forming Chimera Toxin for Application as a Novel Drug-delivery System Tool"},"authors":{"en":[{"name":"Tabata Atsushi"},{"name":"Ohkubo Yukimasa"},{"name":"Sakakura Eriko"},{"name":"Tomoyasu Toshifumi"},{"name":"Ohkura Kazuto"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"田端 厚之"},{"name":"大久保 行将"},{"name":"坂倉 永里子"},{"name":"友安 俊文"},{"name":"大倉 一人"},{"name":"長宗 秀明"}]},"description":{"en":"Cholesterol-dependent cytolysins (CDCs) are pore-forming toxins from Gram-positive bacteria. The aim of this study was to investigate the potential of a CDC, intermedilysin, as a drug-delivery system (DDS) for clinical application. Intermedilysin was modified by the addition of a disulfide bridge to regulate pore formation, by swapping domain 4 to provide cholesterol-binding capacity, and by the introduction of a targeting domain. The resultant chimera protein, His-LTBP-CDC(ss)(IP), was investigated for its use as a DDS tool in vitro. His-LTBP-CDC(ss)(IP) exhibited a regulated pore-forming capacity under reducing conditions. This chimera protein was able to deliver a drug-carrier liposome specifically to the target cell, to be endocytosed into the cell with subsequent release of the components into the cytoplasm. A chimera protein derived from the bacterial pore-forming toxin intermedilysin (His-LTBP-CDC(ss)(IP)) forms the basis for a novel DDS tool.","ja":"Cholesterol-dependent cytolysins (CDCs) are pore-forming toxins from Gram-positive bacteria. The aim of this study was to investigate the potential of a CDC, intermedilysin, as a drug-delivery system (DDS) for clinical application. Intermedilysin was modified by the addition of a disulfide bridge to regulate pore formation, by swapping domain 4 to provide cholesterol-binding capacity, and by the introduction of a targeting domain. The resultant chimera protein, His-LTBP-CDC(ss)(IP), was investigated for its use as a DDS tool in vitro. His-LTBP-CDC(ss)(IP) exhibited a regulated pore-forming capacity under reducing conditions. This chimera protein was able to deliver a drug-carrier liposome specifically to the target cell, to be endocytosed into the cell with subsequent release of the components into the cytoplasm. A chimera protein derived from the bacterial pore-forming toxin intermedilysin (His-LTBP-CDC(ss)(IP)) forms the basis for a novel DDS tool."},"publication_date":"2012-05-14","publication_name":{"en":"Anticancer Research","ja":"Anticancer Research"},"volume":"Vol.32","number":"No.6","starting_page":"2323","ending_page":"2330","languages":["eng"],"referee":true,"identifiers":{"issn":["1791-7530"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:26, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401639"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/21822788","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=250939","label":"url"}],"paper_title":{"en":"Role of Streptococcus intermedius DnaK chaperone system in stress tolerance and pathogenicity","ja":"Role of Streptococcus intermedius DnaK chaperone system in stress tolerance and pathogenicity"},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Tabata Atsushi"},{"name":"Imaki Hidenori"},{"name":"Tsuruno Keigo"},{"name":"Miyazaki Aya"},{"name":"Sonomoto Kenji"},{"name":"Whiley Robert"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"田端 厚之"},{"name":"Imaki Hidenori"},{"name":"Tsuruno Keigo"},{"name":"Miyazaki Aya"},{"name":"Sonomoto Kenji"},{"name":"Whiley Robert"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus intermedius is a facultatively anaerobic, opportunistic pathogen that causes purulent infections and abscess formation. The DnaK chaperone system has been characterized in several pathogenic bacteria and seems to have important functions in stress resistance and pathogenicity. However, the role of DnaK in S. intermedius remains unclear. Therefore, we constructed a dnaK knockout mutant that exhibited slow growth, thermosensitivity, accumulation of GroEL in the cell, and reduced cytotoxicity to HepG2 cells. The level of secretion of a major pathogenic factor, intermedilysin, was not affected by dnaK mutation. We further examined the function and property of the S. intermedius DnaK chaperone system by using Escherichia coli ΔdnaK and ΔrpoH mutant strains. S. intermedius DnaK could not complement the thermosensitivity of E. coli ΔdnaK mutant. However, the intact S. intermedius DnaK chaperone system could complement the thermosensitivity and acid sensitivity of E. coli ΔdnaK mutant. The S. intermedius DnaK chaperone system could regulate the activity and stability of the heat shock transcription factor ς(32) in E. coli, although S. intermedius does not utilize ς(32) for heat shock transcription. The S. intermedius DnaK chaperone system was also able to efficiently eliminate the aggregated proteins from ΔrpoH mutant cells. Overall, our data showed that the S. intermedius DnaK chaperone system has important functions in quality control of cellular proteins but has less participation in the modulation of expression of pathogenic factors.","ja":"Streptococcus intermedius is a facultatively anaerobic, opportunistic pathogen that causes purulent infections and abscess formation. The DnaK chaperone system has been characterized in several pathogenic bacteria and seems to have important functions in stress resistance and pathogenicity. However, the role of DnaK in S. intermedius remains unclear. Therefore, we constructed a dnaK knockout mutant that exhibited slow growth, thermosensitivity, accumulation of GroEL in the cell, and reduced cytotoxicity to HepG2 cells. The level of secretion of a major pathogenic factor, intermedilysin, was not affected by dnaK mutation. We further examined the function and property of the S. intermedius DnaK chaperone system by using Escherichia coli ΔdnaK and ΔrpoH mutant strains. S. intermedius DnaK could not complement the thermosensitivity of E. coli ΔdnaK mutant. However, the intact S. intermedius DnaK chaperone system could complement the thermosensitivity and acid sensitivity of E. coli ΔdnaK mutant. The S. intermedius DnaK chaperone system could regulate the activity and stability of the heat shock transcription factor ς(32) in E. coli, although S. intermedius does not utilize ς(32) for heat shock transcription. The S. intermedius DnaK chaperone system was also able to efficiently eliminate the aggregated proteins from ΔrpoH mutant cells. Overall, our data showed that the S. intermedius DnaK chaperone system has important functions in quality control of cellular proteins but has less participation in the modulation of expression of pathogenic factors."},"publication_date":"2012-01-17","publication_name":{"en":"Cell Stress & Chaperones","ja":"Cell Stress & Chaperones"},"volume":"Vol.17","number":"No.1","starting_page":"41","ending_page":"55","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1007/s12192-011-0284-4"],"issn":["1466-1268"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:27, {"insert":{"user_id":"B000001705","type":"published_papers","id":"30401640"},"force":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/20624907","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=214682","label":"url"}],"paper_title":{"en":"Role of catabolite control protein A in the regulation of intermedilysin production by Streptococcus intermedius.","ja":"Role of catabolite control protein A in the regulation of intermedilysin production by Streptococcus intermedius."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Tabata Atsushi"},{"name":"Riki Hiroshima"},{"name":"Hidenori Imaki"},{"name":"Sachiko Masuda"},{"name":"Robert A. Whiley"},{"name":"Joseph Aduse-Opoku"},{"name":"Ken Kikuchi"},{"name":"Keiichi Hiramatsu"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"田端 厚之"},{"name":"Riki Hiroshima"},{"name":"Hidenori Imaki"},{"name":"Sachiko Masuda"},{"name":"Robert A. Whiley"},{"name":"Joseph Aduse-Opoku"},{"name":"Ken Kikuchi"},{"name":"Keiichi Hiramatsu"},{"name":"長宗 秀明"}]},"description":{"en":"Streptococcus intermedius is an opportunistic pathogen of humans that causes purulent infections, including brain and liver abscesses. This pathogen secretes a human-specific cytolysin, intermedilysin, which has been recognized as a major virulence factor. However, most of the expressional control mechanisms of ily are still unknown. To determine these mechanisms, we analyzed the nucleotide sequence of the ily promoter region. We found a highly homologous region to the catabolite-repressible element (cre) in the ily promoter region and observed a considerable decrease in the amount of secreted intermedilysin when cells were grown in a culture medium containing high concentrations of glucose/utilizable carbohydrates. Disruption of the ccpA gene, which encodes catabolite control protein A, did not induce catabolite repression of ily by glucose/utilizable carbohydrates. In cre mutants, catabolite repression of ily was partially restored, and purified catabolite control protein A bound to an oligonucleotide containing the cre consensus sequence in the ily promoter region. In addition, a prolonged lag phase and slower doubling time of the ccpA mutant cells were observed. Our data show that S. intermedius can modulate ily expression and growth rate through catabolite control protein A-mediated monitoring of the extracellular glucose/utilizable carbohydrate concentration.","ja":"Streptococcus intermedius is an opportunistic pathogen of humans that causes purulent infections, including brain and liver abscesses. This pathogen secretes a human-specific cytolysin, intermedilysin, which has been recognized as a major virulence factor. However, most of the expressional control mechanisms of ily are still unknown. To determine these mechanisms, we analyzed the nucleotide sequence of the ily promoter region. We found a highly homologous region to the catabolite-repressible element (cre) in the ily promoter region and observed a considerable decrease in the amount of secreted intermedilysin when cells were grown in a culture medium containing high concentrations of glucose/utilizable carbohydrates. Disruption of the ccpA gene, which encodes catabolite control protein A, did not induce catabolite repression of ily by glucose/utilizable carbohydrates. In cre mutants, catabolite repression of ily was partially restored, and purified catabolite control protein A bound to an oligonucleotide containing the cre consensus sequence in the ily promoter region. In addition, a prolonged lag phase and slower doubling time of the ccpA mutant cells were observed. Our data show that S. intermedius can modulate ily expression and growth rate through catabolite control protein A-mediated monitoring of the extracellular glucose/utilizable carbohydrate concentration."},"publication_date":"2010-07-02","publication_name":{"en":"Infection and Immunity","ja":"Infection and Immunity"},"volume":"Vol.78","number":"No.9","starting_page":"4012","ending_page":"4021","languages":["eng"],"referee":true,"invited":true,"identifiers":{"doi":["10.1128/IAI.00113-10"],"issn":["1098-5522"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:28, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://repo.lib.tokushima-u.ac.jp/ja/114744","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/20653971","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=214680","label":"url"}],"paper_title":{"en":"Investigation of the chaperone function of the small heat shock protein AgsA.","ja":"Investigation of the chaperone function of the small heat shock protein AgsA."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Tabata Atsushi"},{"name":"Nagamune Hideaki"}],"ja":[{"name":"友安 俊文"},{"name":"田端 厚之"},{"name":"長宗 秀明"}]},"description":{"en":"A small heat shock protein AgsA was originally isolated from Salmonella enterica serovar Typhimurium. We previously demonstrated that AgsA was an effective chaperone that could reduce the amount of heat-aggregated proteins in an Escherichia coli rpoH mutant. AgsA appeared to promote survival at lethal temperatures by cooperating with other chaperones in vivo. To investigate the aggregation prevention mechanisms of AgsA, we constructed N- or C-terminal truncated mutants and compared their properties with wild type AgsA. AgsA showed significant overall homology to wheat sHsp16.9 allowing its three-dimensional structure to be predicted. Truncations of AgsA until the N-terminal 23rd and C-terminal 11th amino acid (AA) from both termini preserved its in vivo chaperone activity. Temperature-controlled gel filtration chromatography showed that purified AgsA could maintain large oligomeric complexes up to 50 degrees C. Destabilization of oligomeric complexes was observed for N-terminal 11- and 17-AA truncated AgsA; C-terminal 11-AA truncated AgsA could not form large oligomeric complexes. AgsA prevented the aggregation of denatured lysozyme, malate dehydrogenase (MDH) and citrate synthase (CS) but did not prevent the aggregation of insulin at 25 degrees C. N-terminal 17-AA truncated AgsA showed no chaperone activity towards MDH. C-terminal 11-AA truncated AgsA showed weak or no chaperone activity towards lysozyme, MDH and CS although it prevented the aggregation of insulin at 25 degrees C. When the same amount of AgsA and C-terminal 11-AA truncated AgsA were mixed (half of respective amount required for efficient chaperone activities), good chaperone activity for all substrates and temperatures was observed. Detectable intermolecular exchanges between AgsA oligomers at 25 degrees C were not observed using fluorescence resonance energy transfer analysis; however, significant exchanges between AgsA oligomers and C-terminal truncated AgsA were observed at 25 degrees C. Our data demonstrate that AgsA has several regions necessary for efficient chaperone activity: region(s) important for lysozyme chaperone activity are located outer surface of the oligomeric complex while those region(s) important for insulin are located inside the oligomeric complex and those for MDH are located within the N-terminal arm. In addition, the equilibrium between the oligomer and the dimer structures appears to be important for its efficient chaperone activity.","ja":"A small heat shock protein AgsA was originally isolated from Salmonella enterica serovar Typhimurium. We previously demonstrated that AgsA was an effective chaperone that could reduce the amount of heat-aggregated proteins in an Escherichia coli rpoH mutant. AgsA appeared to promote survival at lethal temperatures by cooperating with other chaperones in vivo. To investigate the aggregation prevention mechanisms of AgsA, we constructed N- or C-terminal truncated mutants and compared their properties with wild type AgsA. AgsA showed significant overall homology to wheat sHsp16.9 allowing its three-dimensional structure to be predicted. Truncations of AgsA until the N-terminal 23rd and C-terminal 11th amino acid (AA) from both termini preserved its in vivo chaperone activity. Temperature-controlled gel filtration chromatography showed that purified AgsA could maintain large oligomeric complexes up to 50 degrees C. Destabilization of oligomeric complexes was observed for N-terminal 11- and 17-AA truncated AgsA; C-terminal 11-AA truncated AgsA could not form large oligomeric complexes. AgsA prevented the aggregation of denatured lysozyme, malate dehydrogenase (MDH) and citrate synthase (CS) but did not prevent the aggregation of insulin at 25 degrees C. N-terminal 17-AA truncated AgsA showed no chaperone activity towards MDH. C-terminal 11-AA truncated AgsA showed weak or no chaperone activity towards lysozyme, MDH and CS although it prevented the aggregation of insulin at 25 degrees C. When the same amount of AgsA and C-terminal 11-AA truncated AgsA were mixed (half of respective amount required for efficient chaperone activities), good chaperone activity for all substrates and temperatures was observed. Detectable intermolecular exchanges between AgsA oligomers at 25 degrees C were not observed using fluorescence resonance energy transfer analysis; however, significant exchanges between AgsA oligomers and C-terminal truncated AgsA were observed at 25 degrees C. Our data demonstrate that AgsA has several regions necessary for efficient chaperone activity: region(s) important for lysozyme chaperone activity are located outer surface of the oligomeric complex while those region(s) important for insulin are located inside the oligomeric complex and those for MDH are located within the N-terminal arm. In addition, the equilibrium between the oligomer and the dimer structures appears to be important for its efficient chaperone activity."},"publication_date":"2010-06-24","publication_name":{"en":"BMC Biochemistry","ja":"BMC Biochemistry"},"volume":"Vol.11","starting_page":"27","ending_page":"27","languages":["eng"],"referee":true,"invited":true,"identifiers":{"doi":["10.1186/1471-2091-11-27"],"issn":["1471-2091"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:29, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/17565681","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=165084","label":"url"}],"paper_title":{"en":"Chaperone-based procedure to increase yields of soluble recombinant proteins produced in E. coli.","ja":"Chaperone-based procedure to increase yields of soluble recombinant proteins produced in E. coli."},"authors":{"en":[{"name":"Marco de A,"},{"name":"Deuerling E."},{"name":"Mogk A."},{"name":"Tomoyasu Toshifumi"},{"name":"Bukau B."}],"ja":[{"name":"Marco de A,"},{"name":"Deuerling E."},{"name":"Mogk A."},{"name":"友安 俊文"},{"name":"Bukau B."}]},"description":{"en":"BACKGROUND: The overproduction of recombinant proteins in host cells often leads to their misfolding and aggregation. Previous attempts to increase the solubility of recombinant proteins by co-overproduction of individual chaperones were only partially successful. We now assessed the effects of combined overproduction of the functionally cooperating chaperone network of the E. coli cytosol on the solubility of recombinant proteins. RESULTS: A two-step procedure was found to show the strongest enhancement of solubility. In a first step, the four chaperone systems GroEL/GroES, DnaK/DnaJ/GrpE, ClpB and the small HSPs IbpA/IbpB, were coordinately co-overproduced with recombinant proteins to optimize de novo folding. In a second step, protein biosynthesis was inhibited to permit chaperone mediated refolding of misfolded and aggregated proteins in vivo. This novel strategy increased the solubility of 70% of 64 different heterologous proteins tested up to 42-fold. CONCLUSION: The engineered E. coli strains and the two-step procedure presented here led to a remarkable increase in the solubility of a various recombinant proteins and should be applicable to a wide range of target proteins produced in biotechnology.","ja":"BACKGROUND: The overproduction of recombinant proteins in host cells often leads to their misfolding and aggregation. Previous attempts to increase the solubility of recombinant proteins by co-overproduction of individual chaperones were only partially successful. We now assessed the effects of combined overproduction of the functionally cooperating chaperone network of the E. coli cytosol on the solubility of recombinant proteins. RESULTS: A two-step procedure was found to show the strongest enhancement of solubility. In a first step, the four chaperone systems GroEL/GroES, DnaK/DnaJ/GrpE, ClpB and the small HSPs IbpA/IbpB, were coordinately co-overproduced with recombinant proteins to optimize de novo folding. In a second step, protein biosynthesis was inhibited to permit chaperone mediated refolding of misfolded and aggregated proteins in vivo. This novel strategy increased the solubility of 70% of 64 different heterologous proteins tested up to 42-fold. CONCLUSION: The engineered E. coli strains and the two-step procedure presented here led to a remarkable increase in the solubility of a various recombinant proteins and should be applicable to a wide range of target proteins produced in biotechnology."},"publication_date":"2007-06-12","publication_name":{"en":"BMC Biotechnology","ja":"BMC Biotechnology"},"volume":"Vol.7","number":"No.32","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1186/1472-6750-7-32"],"issn":["1472-6750"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:30, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"http://www.blackwell-synergy.com/doi/abs/10.1111/j.1365-2958.2005.05016.x","label":"url"},{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/16430704","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=147260","label":"url"}],"paper_title":{"en":"The DnaK chaperone machinery converts the native FlhD2C2 hetero-tetramer into a functional transcriptional regulator of flagellar regulon expression in Salmonella.","ja":"The DnaK chaperone machinery converts the native FlhD2C2 hetero-tetramer into a functional transcriptional regulator of flagellar regulon expression in Salmonella."},"authors":{"en":[{"name":"Takaya Akiko"},{"name":"Matsui Mari"},{"name":"Tomoyasu Toshifumi"},{"name":"Kaya Michihiro"},{"name":"Yamamoto Tomoko"}],"ja":[{"name":"Takaya Akiko"},{"name":"Matsui Mari"},{"name":"友安 俊文"},{"name":"Kaya Michihiro"},{"name":"Yamamoto Tomoko"}]},"description":{"en":"The DnaK chaperone binds non-specifically to many unfolded polypeptides and also binds selectively to specific substrates. Although its involvement in targeting the unfolded polypeptides to assist proper folding is well documented, less is known about its role in targeting the folded polypeptides. We demonstrate that DnaK regulates the expression of the Salmonella flagellar regulon by modulating the FlhD and FlhC proteins, which function as master regulators at the apex of a transcription hierarchy comprising three classes of genes. FlhD and FlhC form an FlhD2C2 complex that activates sigma70 promoter of class 2 genes. In DeltadnaK cells, FlhD and FlhC proteins seemed to be assembled into hetero-tetrameric FlhD2C2 but the complex was not fully active in class 2 gene transcription, suggesting that the DnaK chaperone is involved in activating native FlhD2C2 complex into a regulator of flagellar regulon expression. This is the first time that involvement of the DnaK chaperone machinery in activating folded oligomerized proteins has been demonstrated.","ja":"The DnaK chaperone binds non-specifically to many unfolded polypeptides and also binds selectively to specific substrates. Although its involvement in targeting the unfolded polypeptides to assist proper folding is well documented, less is known about its role in targeting the folded polypeptides. We demonstrate that DnaK regulates the expression of the Salmonella flagellar regulon by modulating the FlhD and FlhC proteins, which function as master regulators at the apex of a transcription hierarchy comprising three classes of genes. FlhD and FlhC form an FlhD2C2 complex that activates sigma70 promoter of class 2 genes. In DeltadnaK cells, FlhD and FlhC proteins seemed to be assembled into hetero-tetrameric FlhD2C2 but the complex was not fully active in class 2 gene transcription, suggesting that the DnaK chaperone is involved in activating native FlhD2C2 complex into a regulator of flagellar regulon expression. This is the first time that involvement of the DnaK chaperone machinery in activating folded oligomerized proteins has been demonstrated."},"publication_date":"2006-02","publication_name":{"en":"Molecular Microbiology","ja":"Molecular Microbiology"},"volume":"Vol.59","number":"No.4","starting_page":"1327","ending_page":"1340","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1111/j.1365-2958.2005.05016.x"],"issn":["0950-382X"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:31, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/16213673","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=147261","label":"url"}],"paper_title":{"en":"ClpXP controls the expression of LEE genes in enterohaemorrhagic Escherichia coli.","ja":"ClpXP controls the expression of LEE genes in enterohaemorrhagic Escherichia coli."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Takaya A"},{"name":"Handa Y"},{"name":"Karata K"},{"name":"Yamamoto T"}],"ja":[{"name":"友安 俊文"},{"name":"Takaya A"},{"name":"Handa Y"},{"name":"Karata K"},{"name":"Yamamoto T"}]},"description":{"en":"Enterohaemorrhagic Escherichia coli (EHEC) contains a 36-kb pathogenicity island termed the locus of enterocyte effacement (LEE), which encodes a type III secretion system (TTSS) and virulence proteins. In this paper, we show that the O157:H7 Sakai clpPX mutant strongly impaired the secretion of virulence proteins by TTSS and repressed transcription from all the LEE promoters. The rpoS mutation in O157:H7 Sakai enhanced the transcription from all the LEE promoters and the secretion of virulence proteins, and it could partially suppress the defects of the clpPX mutation. These data indicate that the O157:H7 Sakai ClpXP protease is a positive regulator for LEE expression and that this regulation occurs by two pathways: the sigma(S)-dependent and -independent pathways.","ja":"Enterohaemorrhagic Escherichia coli (EHEC) contains a 36-kb pathogenicity island termed the locus of enterocyte effacement (LEE), which encodes a type III secretion system (TTSS) and virulence proteins. In this paper, we show that the O157:H7 Sakai clpPX mutant strongly impaired the secretion of virulence proteins by TTSS and repressed transcription from all the LEE promoters. The rpoS mutation in O157:H7 Sakai enhanced the transcription from all the LEE promoters and the secretion of virulence proteins, and it could partially suppress the defects of the clpPX mutation. These data indicate that the O157:H7 Sakai ClpXP protease is a positive regulator for LEE expression and that this regulation occurs by two pathways: the sigma(S)-dependent and -independent pathways."},"publication_date":"2005-12","publication_name":{"en":"FEMS Microbiology Letters","ja":"FEMS Microbiology Letters"},"volume":"Vol.253","number":"No.1","starting_page":"59","ending_page":"66","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1016/j.femsle.2005.09.020"],"issn":["0378-1097"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:32, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/15617525","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=147262","label":"url"}],"paper_title":{"en":"Derepression of Salmonella pathogenicity island 1 genes within macrophages leads to rapid apoptosis via caspase-1- and caspase-3-dependent pathways.","ja":"Derepression of Salmonella pathogenicity island 1 genes within macrophages leads to rapid apoptosis via caspase-1- and caspase-3-dependent pathways."},"authors":{"en":[{"name":"Takaya A"},{"name":"Suzuki A"},{"name":"Kikuchi Y"},{"name":"Eguchi M"},{"name":"Isogai E"},{"name":"Tomoyasu Toshifumi"},{"name":"Yamamoto T"}],"ja":[{"name":"Takaya A"},{"name":"Suzuki A"},{"name":"Kikuchi Y"},{"name":"Eguchi M"},{"name":"Isogai E"},{"name":"友安 俊文"},{"name":"Yamamoto T"}]},"description":{"en":"Salmonella enterica serovar Typhimurium has been reported to induce apoptosis in infected macrophages within 14 h from the time of infection by a caspase-1-dependent mechanism. Here, we demonstrate that depletion of Lon protease in serovar Typhimurium induces rapid and massive apoptosis in macrophages by a mechanism involving both caspases-1 and -3. This excessive induction of apoptosis was abrogated by disruption of invF, which is required for the expression of the Salmonella pathogenicity island 1 (SPI1) genes. Expression of hilA, a central regulator of SPI1 transcription, was repressed in the macrophages after phagocytosis, but this gene was continuously expressed when the DeltaLon mutant grew within the macrophages, so the SPI1 proteins accumulated. Thus, the increase in macrophage apoptosis induced by the DeltaLon mutant could result from continued expression of SPI1 genes under conditions where they are normally repressed. Once Salmonella has established a systemic infection, excess apoptosis of macrophages cells upon which the organism is reliant would be detrimental to the pathogen. Therefore, the Lon protease may be required to suppress apoptosis sufficiently to allow time for the bacterium to replicate, escape and invade new macrophages.","ja":"Salmonella enterica serovar Typhimurium has been reported to induce apoptosis in infected macrophages within 14 h from the time of infection by a caspase-1-dependent mechanism. Here, we demonstrate that depletion of Lon protease in serovar Typhimurium induces rapid and massive apoptosis in macrophages by a mechanism involving both caspases-1 and -3. This excessive induction of apoptosis was abrogated by disruption of invF, which is required for the expression of the Salmonella pathogenicity island 1 (SPI1) genes. Expression of hilA, a central regulator of SPI1 transcription, was repressed in the macrophages after phagocytosis, but this gene was continuously expressed when the DeltaLon mutant grew within the macrophages, so the SPI1 proteins accumulated. Thus, the increase in macrophage apoptosis induced by the DeltaLon mutant could result from continued expression of SPI1 genes under conditions where they are normally repressed. Once Salmonella has established a systemic infection, excess apoptosis of macrophages cells upon which the organism is reliant would be detrimental to the pathogen. Therefore, the Lon protease may be required to suppress apoptosis sufficiently to allow time for the bacterium to replicate, escape and invade new macrophages."},"publication_date":"2005-01","publication_name":{"en":"Cellular Microbiology","ja":"Cellular Microbiology"},"volume":"Vol.7","number":"No.1","starting_page":"79","ending_page":"90","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1111/j.1462-5822.2004.00435.x"],"issn":["1462-5814"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:33, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/14977940","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334596","label":"url"}],"paper_title":{"en":"The DnaK/DnaJ chaperone machinery of Salmonella enterica serovar Typhimurium is essential for invasion of epithelial cells and survival within macrophages, leading to systemic infection.","ja":"The DnaK/DnaJ chaperone machinery of Salmonella enterica serovar Typhimurium is essential for invasion of epithelial cells and survival within macrophages, leading to systemic infection."},"authors":{"en":[{"name":"Takaya A"},{"name":"Tomoyasu Toshifumi"},{"name":"Matsui H"},{"name":"Yamamoto T"}],"ja":[{"name":"Takaya A"},{"name":"友安 俊文"},{"name":"Matsui H"},{"name":"Yamamoto T"}]},"description":{"en":"Salmonella enterica serovar Typhimurium, similar to various facultative intracellular pathogens, has been shown to respond to the hostile conditions inside macrophages of the host organism by inducing stress proteins, such as DnaK. DnaK forms a chaperone machinery with the cochaperones DnaJ and GrpE. To elucidate the role of the DnaK chaperone machinery in the pathogenesis of S. enterica serovar Typhimurium, we first constructed an insertional mutation in the dnaK-dnaJ operon of pathogenic strain chi3306. The DnaK/DnaJ-depleted mutant was temperature sensitive for growth, that is, nonviable above 39 degrees C. We then isolated a spontaneously occurring revertant of the dnaK-dnaJ-disrupted mutant at 39 degrees C and used it for infection of mice. The mutant lost the ability to cause a lethal systemic disease in mice. The impaired ability for virulence was restored when a functional copy of the dnaK-dnaJ operon was provided, suggesting that the DnaK/DnaJ chaperone machinery is required by Salmonella for the systemic infection of mice. This result also indicates that with respect to the DnaK/DnaJ chaperone machinery, the cellular requirements for growth at a high temperature are not identical to the cellular requirements for the pathogenesis of Salmonella. Macrophage survival assays revealed that the DnaK/DnaJ-depleted mutant could not survive or proliferate at all within macrophages. Of further interest are the findings that the mutant could neither invade cultured epithelial cells nor secrete any of the invasion proteins encoded within Salmonella pathogenicity island 1. This is the first time that the DnaK/DnaJ chaperone machinery has been shown to be involved in bacterial invasion of epithelial cells.","ja":"Salmonella enterica serovar Typhimurium, similar to various facultative intracellular pathogens, has been shown to respond to the hostile conditions inside macrophages of the host organism by inducing stress proteins, such as DnaK. DnaK forms a chaperone machinery with the cochaperones DnaJ and GrpE. To elucidate the role of the DnaK chaperone machinery in the pathogenesis of S. enterica serovar Typhimurium, we first constructed an insertional mutation in the dnaK-dnaJ operon of pathogenic strain chi3306. The DnaK/DnaJ-depleted mutant was temperature sensitive for growth, that is, nonviable above 39 degrees C. We then isolated a spontaneously occurring revertant of the dnaK-dnaJ-disrupted mutant at 39 degrees C and used it for infection of mice. The mutant lost the ability to cause a lethal systemic disease in mice. The impaired ability for virulence was restored when a functional copy of the dnaK-dnaJ operon was provided, suggesting that the DnaK/DnaJ chaperone machinery is required by Salmonella for the systemic infection of mice. This result also indicates that with respect to the DnaK/DnaJ chaperone machinery, the cellular requirements for growth at a high temperature are not identical to the cellular requirements for the pathogenesis of Salmonella. Macrophage survival assays revealed that the DnaK/DnaJ-depleted mutant could not survive or proliferate at all within macrophages. Of further interest are the findings that the mutant could neither invade cultured epithelial cells nor secrete any of the invasion proteins encoded within Salmonella pathogenicity island 1. This is the first time that the DnaK/DnaJ chaperone machinery has been shown to be involved in bacterial invasion of epithelial cells."},"publication_date":"2004-03","publication_name":{"en":"Infection and Immunity","ja":"Infection and Immunity"},"volume":"Vol.72","number":"No.3","starting_page":"1364","ending_page":"1373","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/IAI.72.3.1364-1373.2004"],"issn":["0019-9567"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:34, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334597","label":"url"}],"paper_title":{"en":"A new heat-shock gene agsA, which encodes a small chaperone involved in suppressing protein aggregation in Salmonella entrica serovar Typhimurium.","ja":"A new heat-shock gene agsA, which encodes a small chaperone involved in suppressing protein aggregation in Salmonella entrica serovar Typhimurium."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Takaya A"},{"name":"Sasaki T"},{"name":"Kikuno R"},{"name":"Nagase T"},{"name":"Morioka M"},{"name":"Yamamoto T"}],"ja":[{"name":"友安 俊文"},{"name":"Takaya A"},{"name":"Sasaki T"},{"name":"Kikuno R"},{"name":"Nagase T"},{"name":"Morioka M"},{"name":"Yamamoto T"}]},"publication_date":"2003-11","publication_name":{"en":"Journal of Bacteriology","ja":"Journal of Bacteriology"},"volume":"Vol.185","number":"No.21","starting_page":"6331","ending_page":"6339","languages":["eng"],"referee":true,"identifiers":{"issn":["0021-9193"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:35, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/12911840","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334598","label":"url"}],"paper_title":{"en":"Effects of disruption of heat shock genes on susceptibility of Escherichia coli to fluoroquinolones.","ja":"Effects of disruption of heat shock genes on susceptibility of Escherichia coli to fluoroquinolones."},"authors":{"en":[{"name":"Yamaguchi Y"},{"name":"Tomoyasu Toshifumi"},{"name":"Takaya A"},{"name":"Morioka M"},{"name":"Yamamoto T"}],"ja":[{"name":"Yamaguchi Y"},{"name":"友安 俊文"},{"name":"Takaya A"},{"name":"Morioka M"},{"name":"Yamamoto T"}]},"description":{"en":"It is well known that expression of certain bacterial genes responds rapidly to such stimuli as exposure to toxic chemicals and physical agents. It is generally believed that the proteins encoded in these genes are important for successful survival of the organism under the hostile conditions. Analogously, the proteins induced in bacterial cells exposed to antibiotics are believed to affect the organisms' susceptibility to these agents. We demonstrated that Escherichia coli cells exposed to levofloxacin (LVFX), a fluoroquinolone (FQ), induce the syntheses of heat shock proteins and RecA. To examine whether the heat shock proteins affect the bactericidal action of FQs, we constructed E. coli strains with mutations in various heat shock genes and tested their susceptibility to FQs. Mutations in dnaK, groEL, and lon increased this susceptibility; the lon mutant exhibited the greatest effects. The increased susceptibility of the lon mutant was corroborated by experiments in which the gene encoding the cell division inhibitor, SulA, was subsequently disrupted. SulA is induced by the SOS response and degraded by the Lon protease. The findings suggest that the hypersusceptibility of the lon mutant to FQs could be due to abnormally high levels of SulA protein resulting from the depletion of Lon and the continuous induction of the SOS response in the presence of FQs. The present results show that the bactericidal action of FQs is moderately affected by the DnaK and GroEL chaperones and strongly affected by the Lon protease. FQs have contributed successfully to the treatment of various bacterial infections, but their widespread use and often misuse, coupled with emerging resistance, have gradually compromised their utility. Our results suggest that agents capable of inhibiting the Lon protease have potential for combination therapy with FQs.","ja":"It is well known that expression of certain bacterial genes responds rapidly to such stimuli as exposure to toxic chemicals and physical agents. It is generally believed that the proteins encoded in these genes are important for successful survival of the organism under the hostile conditions. Analogously, the proteins induced in bacterial cells exposed to antibiotics are believed to affect the organisms' susceptibility to these agents. We demonstrated that Escherichia coli cells exposed to levofloxacin (LVFX), a fluoroquinolone (FQ), induce the syntheses of heat shock proteins and RecA. To examine whether the heat shock proteins affect the bactericidal action of FQs, we constructed E. coli strains with mutations in various heat shock genes and tested their susceptibility to FQs. Mutations in dnaK, groEL, and lon increased this susceptibility; the lon mutant exhibited the greatest effects. The increased susceptibility of the lon mutant was corroborated by experiments in which the gene encoding the cell division inhibitor, SulA, was subsequently disrupted. SulA is induced by the SOS response and degraded by the Lon protease. The findings suggest that the hypersusceptibility of the lon mutant to FQs could be due to abnormally high levels of SulA protein resulting from the depletion of Lon and the continuous induction of the SOS response in the presence of FQs. The present results show that the bactericidal action of FQs is moderately affected by the DnaK and GroEL chaperones and strongly affected by the Lon protease. FQs have contributed successfully to the treatment of various bacterial infections, but their widespread use and often misuse, coupled with emerging resistance, have gradually compromised their utility. Our results suggest that agents capable of inhibiting the Lon protease have potential for combination therapy with FQs."},"publication_date":"2003-08-12","publication_name":{"en":"BMC Microbiology","ja":"BMC Microbiology"},"volume":"Vol.3","number":"No.1","starting_page":"16","ending_page":"16","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1186/1471-2180-3-16"],"issn":["1471-2180"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:36, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/12675803","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334599","label":"url"}],"paper_title":{"en":"Turnover of FlhD and FlhC, master regulator proteins for Salmonella flagellum biogenesis, by the ATP-dependent ClpXP protease.","ja":"Turnover of FlhD and FlhC, master regulator proteins for Salmonella flagellum biogenesis, by the ATP-dependent ClpXP protease."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Takaya A"},{"name":"Isogai E"},{"name":"Yamamoto T"}],"ja":[{"name":"友安 俊文"},{"name":"Takaya A"},{"name":"Isogai E"},{"name":"Yamamoto T"}]},"description":{"en":"In enterobacteria such as Salmonella, flagellar biogenesis is dependent upon the master operon flhDC at the apex of the flagellar gene hierarchy, which is divided into three classes 1, 2 and 3. Previously we reported that depletion of the ClpXP ATP-dependent protease results in dramatic enhancement of class 2 and class 3 gene transcription, whereas the transcription level of the flhDC operon remains normal in Salmonella enterica serovar Typhimurium. This suggests that the ClpXP protease may be responsible for the turnover of the FlhD and FlhC master regulators (Tomoyasu, T., Ohkishi, T., Ukyo, Y., Tokumitsu, A., Takaya, A., Suzuki, M. et al., 2002, J Bacteriol 184:645-653). In this study, to establish the role of the ClpXP protease in the turnover of FlhD and FlhC proteins, we analysed levels of the FlhD and FlhC proteins in wild-type and ClpXP mutant cells using anti-FlhD and anti-FlhC antibodies. The results show that both FlhD and FlhC proteins are markedly accumulated in ClpXP mutant cells and the half-life of FlhC is approximately fivefold longer in the ClpXP mutant, suggesting that the ClpXP protease is responsible for the degradation of FlhD and FlhC. The results also show that the ClpXP protease degrades both proteins in FlhD2FlhC2 complex but does not seem to recognize the respective subunits synthesized individually. Taken together, it is suggested that the cellular concentration of the FlhD2FlhC2 master regulator is tightly controlled at the post-translational level by the ClpXP protease. We also examined the role of other members of the ATP-dependent protease family in the regulation of flagellar biogenesis and concluded that only ClpXP in this family functions as a negative regulator for flagellar biogenesis in Salmonella.","ja":"In enterobacteria such as Salmonella, flagellar biogenesis is dependent upon the master operon flhDC at the apex of the flagellar gene hierarchy, which is divided into three classes 1, 2 and 3. Previously we reported that depletion of the ClpXP ATP-dependent protease results in dramatic enhancement of class 2 and class 3 gene transcription, whereas the transcription level of the flhDC operon remains normal in Salmonella enterica serovar Typhimurium. This suggests that the ClpXP protease may be responsible for the turnover of the FlhD and FlhC master regulators (Tomoyasu, T., Ohkishi, T., Ukyo, Y., Tokumitsu, A., Takaya, A., Suzuki, M. et al., 2002, J Bacteriol 184:645-653). In this study, to establish the role of the ClpXP protease in the turnover of FlhD and FlhC proteins, we analysed levels of the FlhD and FlhC proteins in wild-type and ClpXP mutant cells using anti-FlhD and anti-FlhC antibodies. The results show that both FlhD and FlhC proteins are markedly accumulated in ClpXP mutant cells and the half-life of FlhC is approximately fivefold longer in the ClpXP mutant, suggesting that the ClpXP protease is responsible for the degradation of FlhD and FlhC. The results also show that the ClpXP protease degrades both proteins in FlhD2FlhC2 complex but does not seem to recognize the respective subunits synthesized individually. Taken together, it is suggested that the cellular concentration of the FlhD2FlhC2 master regulator is tightly controlled at the post-translational level by the ClpXP protease. We also examined the role of other members of the ATP-dependent protease family in the regulation of flagellar biogenesis and concluded that only ClpXP in this family functions as a negative regulator for flagellar biogenesis in Salmonella."},"publication_date":"2003-04","publication_name":{"en":"Molecular Microbiology","ja":"Molecular Microbiology"},"volume":"Vol.48","number":"No.2","starting_page":"443","ending_page":"452","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1046/j.1365-2958.2003.03437.x"],"issn":["0950-382X"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:37, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/12540547","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334600","label":"url"}],"paper_title":{"en":"Lon, a stress-induced ATP-dependent protease is critically important for the systemic Salmonella infection of mice.","ja":"Lon, a stress-induced ATP-dependent protease is critically important for the systemic Salmonella infection of mice."},"authors":{"en":[{"name":"Takaya A"},{"name":"Suzuki M"},{"name":"Matsui H"},{"name":"Tomoyasu Toshifumi"},{"name":"Sashinami H"},{"name":"Nakane A"},{"name":"Yamamoto T"}],"ja":[{"name":"Takaya A"},{"name":"Suzuki M"},{"name":"Matsui H"},{"name":"友安 俊文"},{"name":"Sashinami H"},{"name":"Nakane A"},{"name":"Yamamoto T"}]},"description":{"en":"Studies on the pathogenesis of Salmonella enterica serovar Typhimurium infections in mice have revealed the presence of two prominent virulence characteristics-the invasion of the nonphagocytic cells to penetrate the intestinal epithelium and the proliferation within host phagocytic cells to cause a systemic spread and the colonization of host organs. We have recently demonstrated that the ATP-dependent Lon protease of S. enterica serovar Typhimurium negatively regulates the efficiency of invasion of epithelial cells and the expression of invasion genes (A. Takaya et al., J. Bacteriol. 184:224-232, 2002). This study was performed to reveal the contribution of the Lon protease to the virulence of S. enterica serovar Typhimurium in mice. Determination of 50% lethal doses for the lon disruption mutant and wild-type strain revealed that the mutant was highly attenuated when administered either orally or intraperitoneally to BALB/c mice. The mutant was also found to be able to reach extraintestinal sites but unable to proliferate efficiently within the spleen and cause lethal systemic disease of mice. Macrophage survival assays revealed that the lon disruption mutant could not survive or proliferate within murine macrophages. In addition, the mutant showed extremely increased susceptibility to hydrogen peroxide, which contributes to the bactericidal capacity of phagocytes. The mutant also showed increased sensitivity to acidic conditions. Taken together, the impaired ability of the lon disruption mutant to survive and grow in macrophages could be due to the enhanced susceptibility to the oxygen-dependent killing mechanism associated with respiratory burst and the low phagosomal pH. These results suggest that the Lon protease is essentially involved in the systemic infection of mice with S. enterica serovar Typhimurium, which can be fatal. Of further interest is the finding that the lon disruption mutant persists in the BALB/c mice for long periods without causing an overwhelming systemic infection.","ja":"Studies on the pathogenesis of Salmonella enterica serovar Typhimurium infections in mice have revealed the presence of two prominent virulence characteristics-the invasion of the nonphagocytic cells to penetrate the intestinal epithelium and the proliferation within host phagocytic cells to cause a systemic spread and the colonization of host organs. We have recently demonstrated that the ATP-dependent Lon protease of S. enterica serovar Typhimurium negatively regulates the efficiency of invasion of epithelial cells and the expression of invasion genes (A. Takaya et al., J. Bacteriol. 184:224-232, 2002). This study was performed to reveal the contribution of the Lon protease to the virulence of S. enterica serovar Typhimurium in mice. Determination of 50% lethal doses for the lon disruption mutant and wild-type strain revealed that the mutant was highly attenuated when administered either orally or intraperitoneally to BALB/c mice. The mutant was also found to be able to reach extraintestinal sites but unable to proliferate efficiently within the spleen and cause lethal systemic disease of mice. Macrophage survival assays revealed that the lon disruption mutant could not survive or proliferate within murine macrophages. In addition, the mutant showed extremely increased susceptibility to hydrogen peroxide, which contributes to the bactericidal capacity of phagocytes. The mutant also showed increased sensitivity to acidic conditions. Taken together, the impaired ability of the lon disruption mutant to survive and grow in macrophages could be due to the enhanced susceptibility to the oxygen-dependent killing mechanism associated with respiratory burst and the low phagosomal pH. These results suggest that the Lon protease is essentially involved in the systemic infection of mice with S. enterica serovar Typhimurium, which can be fatal. Of further interest is the finding that the lon disruption mutant persists in the BALB/c mice for long periods without causing an overwhelming systemic infection."},"publication_date":"2003-02","publication_name":{"en":"Infection and Immunity","ja":"Infection and Immunity"},"volume":"Vol.71","number":"No.2","starting_page":"690","ending_page":"696","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/IAI.71.2.690-696.2003"],"issn":["0019-9567"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:38, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/12496146","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334601","label":"url"}],"paper_title":{"en":"Oral immunization with ATP-dependent protease-deficient mutants protects mice against subsequent oral challenge with virulent Salmonella enterica serovar typhimurium.","ja":"Oral immunization with ATP-dependent protease-deficient mutants protects mice against subsequent oral challenge with virulent Salmonella enterica serovar typhimurium."},"authors":{"en":[{"name":"Matsui H"},{"name":"Suzuki M"},{"name":"Isshiki Y"},{"name":"Eguchi M"},{"name":"Kikuchi Y"},{"name":"Motokawa K"},{"name":"Takaya A"},{"name":"Tomoyasu Toshifumi"},{"name":"Yamamoto T"}],"ja":[{"name":"Matsui H"},{"name":"Suzuki M"},{"name":"Isshiki Y"},{"name":"Eguchi M"},{"name":"Kikuchi Y"},{"name":"Motokawa K"},{"name":"Takaya A"},{"name":"友安 俊文"},{"name":"Yamamoto T"}]},"description":{"en":"We evaluated the efficacy of mutants with a deletion of the stress response protease gene as candidates for live oral vaccine strains against Salmonella infection through infection studies with mice by using a Salmonella enterica serovar Typhimurium mutant with a disruption of the ClpXP or Lon protease. In vitro, the ClpXP protease regulates flagellum synthesis and the ClpXP-deficient mutant strain exhibits hyperflagellated bacterial cells (T. Tomoyasu et al., J. Bacteriol. 184:645-653, 2002). On the other hand, the Lon protease negatively regulates the efficacy of invading epithelial cells and the expression of invasion genes (A. Takaya et al., J. Bacteriol. 184:224-232, 2002). When 5-week-old BALB/c mice were orally administered 5 x 10(8) CFU of the ClpXP- or Lon-deficient strain, bacteria were detected with 10(3) to 10(4) CFU in the spleen, mesenteric lymph nodes, Peyer's patches, and cecum 1 week after inoculation and the bacteria then decreased gradually in each tissue. Significant increases of lipopolysaccharide-specific immunoglobulin G (IgG) and secretory IgA were detected at week 4 and maintained until at least week 12 after inoculation in serum and bile, respectively. Immunization with the ClpXP- or Lon-deficient strain protected mice against oral challenge with the serovar Typhimurium virulent strain. Both the challenged virulent and immunized avirulent salmonellae were completely cleared from the spleen, mesenteric lymph nodes, Peyer's patches, and even cecum 5 days after the challenge. These data indicate that Salmonella with a disruption of the ATP-dependent protease ClpXP or Lon can be useful in developing a live vaccine strain.","ja":"We evaluated the efficacy of mutants with a deletion of the stress response protease gene as candidates for live oral vaccine strains against Salmonella infection through infection studies with mice by using a Salmonella enterica serovar Typhimurium mutant with a disruption of the ClpXP or Lon protease. In vitro, the ClpXP protease regulates flagellum synthesis and the ClpXP-deficient mutant strain exhibits hyperflagellated bacterial cells (T. Tomoyasu et al., J. Bacteriol. 184:645-653, 2002). On the other hand, the Lon protease negatively regulates the efficacy of invading epithelial cells and the expression of invasion genes (A. Takaya et al., J. Bacteriol. 184:224-232, 2002). When 5-week-old BALB/c mice were orally administered 5 x 10(8) CFU of the ClpXP- or Lon-deficient strain, bacteria were detected with 10(3) to 10(4) CFU in the spleen, mesenteric lymph nodes, Peyer's patches, and cecum 1 week after inoculation and the bacteria then decreased gradually in each tissue. Significant increases of lipopolysaccharide-specific immunoglobulin G (IgG) and secretory IgA were detected at week 4 and maintained until at least week 12 after inoculation in serum and bile, respectively. Immunization with the ClpXP- or Lon-deficient strain protected mice against oral challenge with the serovar Typhimurium virulent strain. Both the challenged virulent and immunized avirulent salmonellae were completely cleared from the spleen, mesenteric lymph nodes, Peyer's patches, and even cecum 5 days after the challenge. These data indicate that Salmonella with a disruption of the ATP-dependent protease ClpXP or Lon can be useful in developing a live vaccine strain."},"publication_date":"2003-01","publication_name":{"en":"Infection and Immunity","ja":"Infection and Immunity"},"volume":"Vol.71","number":"No.1","starting_page":"30","ending_page":"39","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/IAI.71.1.30-39.2003"],"issn":["0019-9567"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:39, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334602","label":"url"}],"paper_title":{"en":"The ClpXP ATP-dependent protease regulates flagellum synthesis in Salmonella enterica serovar Typhimurium.","ja":"The ClpXP ATP-dependent protease regulates flagellum synthesis in Salmonella enterica serovar Typhimurium."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Ohkishi T"},{"name":"Ukyo Y"},{"name":"Tokumitsu A"},{"name":"Takaya A"},{"name":"Suzuki M"},{"name":"Sekiya K"},{"name":"Matsui H"},{"name":"Kutsukake K"},{"name":"Yamamoto T"}],"ja":[{"name":"友安 俊文"},{"name":"Ohkishi T"},{"name":"Ukyo Y"},{"name":"Tokumitsu A"},{"name":"Takaya A"},{"name":"Suzuki M"},{"name":"Sekiya K"},{"name":"Matsui H"},{"name":"Kutsukake K"},{"name":"Yamamoto T"}]},"publication_date":"2002-02","publication_name":{"en":"Journal of Bacteriology","ja":"Journal of Bacteriology"},"volume":"Vol.184","number":"No.3","starting_page":"645","ending_page":"653","languages":["eng"],"referee":true,"identifiers":{"issn":["0021-9193"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:40, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334603","label":"url"}],"paper_title":{"en":"The ATP-dependent Lon protease of Salmonella enterica serovar Typhimurium regulates invasion and expression of genes encoded on Salmonella pathogenicity island 1.","ja":"The ATP-dependent Lon protease of Salmonella enterica serovar Typhimurium regulates invasion and expression of genes encoded on Salmonella pathogenicity island 1."},"authors":{"en":[{"name":"Takaya A"},{"name":"Tomoyasu Toshifumi"},{"name":"Tokumitsu A"},{"name":"Morioka M"},{"name":"Yamamoto T"}],"ja":[{"name":"Takaya A"},{"name":"友安 俊文"},{"name":"Tokumitsu A"},{"name":"Morioka M"},{"name":"Yamamoto T"}]},"publication_date":"2002-01","publication_name":{"en":"Journal of Bacteriology","ja":"Journal of Bacteriology"},"volume":"Vol.184","number":"No.1","starting_page":"224","ending_page":"232","languages":["eng"],"referee":true,"identifiers":{"issn":["0021-9193"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:41, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334604","label":"url"}],"paper_title":{"en":"The C terminus of sigma32 is not essential for degradation by FtsH.","ja":"The C terminus of sigma32 is not essential for degradation by FtsH."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Arsene F"},{"name":"Ogura T"},{"name":"Bukau B"}],"ja":[{"name":"友安 俊文"},{"name":"Arsene F"},{"name":"Ogura T"},{"name":"Bukau B"}]},"publication_date":"2001-10","publication_name":{"en":"Journal of Bacteriology","ja":"Journal of Bacteriology"},"volume":"Vol.183","number":"No.20","starting_page":"5911","ending_page":"5917","languages":["eng"],"referee":true,"identifiers":{"issn":["0021-9193"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:42, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/11292737","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334605","label":"url"}],"paper_title":{"en":"Disruption of the Genes for ClpXP Protease in Salmonella enterica Serovar Typhimurium Results in a Persistent Infection in Mouse and Development of the Persistence Requires Endogenous Gamma Interferon and Tumor Necrosis Factor Alpha.","ja":"Disruption of the Genes for ClpXP Protease in Salmonella enterica Serovar Typhimurium Results in a Persistent Infection in Mouse and Development of the Persistence Requires Endogenous Gamma Interferon and Tumor Necrosis Factor Alpha."},"authors":{"en":[{"name":"Yamamoto T"},{"name":"Sashinami H"},{"name":"Takaya A"},{"name":"Tomoyasu Toshifumi"},{"name":"Matsui H"},{"name":"Hanawa T"},{"name":"Kamiya S"},{"name":"Nakane A"}],"ja":[{"name":"Yamamoto T"},{"name":"Sashinami H"},{"name":"Takaya A"},{"name":"友安 俊文"},{"name":"Matsui H"},{"name":"Hanawa T"},{"name":"Kamiya S"},{"name":"Nakane A"}]},"description":{"en":"The enteric pathogen Salmonella enterica serovar Typhimurium, similar to other facultative intracellular pathogens, has been shown to respond to the hostile conditions inside macrophages of the host organism by producing a set of stress proteins that are also induced by various environmental stresses. The stress-induced ClpXP protease is a member of the ATP-dependent proteases, which are known to be responsible for more than 90% of all proteolysis in Escherichia coli. To investigate the contribution of the ClpXP protease to the virulence of serovar Typhimurium we initially cloned the clpP and clpX operon from the pathogenic strain serovar Typhimurium chi3306 and then created insertional mutations in the clpP and/or clpX gene. The Delta clpP and Delta clpX mutants were used to inoculate BALB/c mice by either the intraperitoneal or the oral route and found to be limited in their ability to colonize organs of the lymphatic system and to cause systemic disease in the host. A variety of experiments were performed to determine the possible reasons for the loss of virulence. An oxygen-dependent killing assay using hydrogen peroxide and paraquat (a superoxide anion generator) and a serum killing assay using murine serum demonstrated that all of the serovar Typhimurium Delta clpP and Delta clpX mutants were as resistant to these killing mechanisms as the wild-type strain. On the other hand, the macrophage survival assay revealed that all these mutants were more sensitive to the intracellular environment than the wild-type strain and were unable to grow or survive within peritoneal macrophages of BALB/c mice. In addition, it was revealed that the serovar Typhimurium ClpXP-depleted mutant was not completely cleared but found to persist at low levels within spleens and livers of mice. Interferon gamma-deficient mice and tumor necrosis factor alpha-deficient mice failed to survive the attenuated serovar Typhimurium infections, suggesting that both endogenous cytokines are essential for regulation of persistent infection with serovar Typhimurium.","ja":"The enteric pathogen Salmonella enterica serovar Typhimurium, similar to other facultative intracellular pathogens, has been shown to respond to the hostile conditions inside macrophages of the host organism by producing a set of stress proteins that are also induced by various environmental stresses. The stress-induced ClpXP protease is a member of the ATP-dependent proteases, which are known to be responsible for more than 90% of all proteolysis in Escherichia coli. To investigate the contribution of the ClpXP protease to the virulence of serovar Typhimurium we initially cloned the clpP and clpX operon from the pathogenic strain serovar Typhimurium chi3306 and then created insertional mutations in the clpP and/or clpX gene. The Delta clpP and Delta clpX mutants were used to inoculate BALB/c mice by either the intraperitoneal or the oral route and found to be limited in their ability to colonize organs of the lymphatic system and to cause systemic disease in the host. A variety of experiments were performed to determine the possible reasons for the loss of virulence. An oxygen-dependent killing assay using hydrogen peroxide and paraquat (a superoxide anion generator) and a serum killing assay using murine serum demonstrated that all of the serovar Typhimurium Delta clpP and Delta clpX mutants were as resistant to these killing mechanisms as the wild-type strain. On the other hand, the macrophage survival assay revealed that all these mutants were more sensitive to the intracellular environment than the wild-type strain and were unable to grow or survive within peritoneal macrophages of BALB/c mice. In addition, it was revealed that the serovar Typhimurium ClpXP-depleted mutant was not completely cleared but found to persist at low levels within spleens and livers of mice. Interferon gamma-deficient mice and tumor necrosis factor alpha-deficient mice failed to survive the attenuated serovar Typhimurium infections, suggesting that both endogenous cytokines are essential for regulation of persistent infection with serovar Typhimurium."},"publication_date":"2001-05","publication_name":{"en":"Infection and Immunity","ja":"Infection and Immunity"},"volume":"Vol.69","number":"No.5","starting_page":"3164","ending_page":"3174","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1128/IAI.69.5.3164-3174.2001"],"issn":["0019-9567"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:43, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://www.ncbi.nlm.nih.gov/pubmed/11309122","label":"url"},{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334606","label":"url"}],"paper_title":{"en":"Genetic dissection of the roles of chaperones and proteases in protein folding and degradation in the Escherichia coli cytosol.","ja":"Genetic dissection of the roles of chaperones and proteases in protein folding and degradation in the Escherichia coli cytosol."},"authors":{"en":[{"name":"Tomoyasu Toshifumi"},{"name":"Mogk A"},{"name":"Langen H"},{"name":"Goloubinoff P"},{"name":"Bukau B"}],"ja":[{"name":"友安 俊文"},{"name":"Mogk A"},{"name":"Langen H"},{"name":"Goloubinoff P"},{"name":"Bukau B"}]},"description":{"en":"We investigated the roles of chaperones and proteases in quality control of proteins in the Escherichia coli cytosol. In DeltarpoH mutants, which lack the heat shock transcription factor and therefore have low levels of all major cytosolic proteases and chaperones except GroEL and trigger factor, 5-10% and 20-30% of total protein aggregated at 30 degrees C and 42 degrees C respectively. The aggregates contained 350-400 protein species, of which 93 were identified by mass spectrometry. The aggregated protein species were similar at both temperatures, indicating that thermolabile proteins require folding assistance by chaperones already at 30 degrees C, and showed strong overlap with previously identified DnaK substrates. Overproduction of the DnaK system, or low-level production of the DnaK system and ClpB, prevented aggregation and provided thermotolerance to DeltarpoH mutants, indicating key roles for these chaperones in protein quality control and stress survival. In rpoH+ cells, DnaK depletion did not lead to protein aggregation at 30 degrees C, which is probably the result of high levels of proteases and thus suggests that DnaK is not a prerequisite for proteolysis of misfolded proteins. Lon was the most efficient protease in degrading misfolded proteins in DnaK-depleted cells. At 42 degrees C, ClpXP and Lon became essential for viability of cells with low DnaK levels, indicating synergistic action of proteases and the DnaK system, which is essential for cell growth at 42 degrees C.","ja":"We investigated the roles of chaperones and proteases in quality control of proteins in the Escherichia coli cytosol. In DeltarpoH mutants, which lack the heat shock transcription factor and therefore have low levels of all major cytosolic proteases and chaperones except GroEL and trigger factor, 5-10% and 20-30% of total protein aggregated at 30 degrees C and 42 degrees C respectively. The aggregates contained 350-400 protein species, of which 93 were identified by mass spectrometry. The aggregated protein species were similar at both temperatures, indicating that thermolabile proteins require folding assistance by chaperones already at 30 degrees C, and showed strong overlap with previously identified DnaK substrates. Overproduction of the DnaK system, or low-level production of the DnaK system and ClpB, prevented aggregation and provided thermotolerance to DeltarpoH mutants, indicating key roles for these chaperones in protein quality control and stress survival. In rpoH+ cells, DnaK depletion did not lead to protein aggregation at 30 degrees C, which is probably the result of high levels of proteases and thus suggests that DnaK is not a prerequisite for proteolysis of misfolded proteins. Lon was the most efficient protease in degrading misfolded proteins in DnaK-depleted cells. At 42 degrees C, ClpXP and Lon became essential for viability of cells with low DnaK levels, indicating synergistic action of proteases and the DnaK system, which is essential for cell growth at 42 degrees C."},"publication_date":"2001-04","publication_name":{"en":"Molecular Microbiology","ja":"Molecular Microbiology"},"volume":"Vol.40","number":"No.2","starting_page":"397","ending_page":"413","languages":["eng"],"referee":true,"identifiers":{"doi":["10.1046/j.1365-2958.2001.02383.x"],"issn":["0950-382X"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:44, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334607","label":"url"}],"paper_title":{"en":"Identification of thermolabile Escherichia coli proteins: prevention and reversion of aggregation by DnaK and ClpB.","ja":"Identification of thermolabile Escherichia coli proteins: prevention and reversion of aggregation by DnaK and ClpB."},"authors":{"en":[{"name":"Mogk A"},{"name":"Tomoyasu Toshifumi"},{"name":"Goloubinoff P"},{"name":"Rudiger S"},{"name":"Roder D"},{"name":"Langen H"},{"name":"Bukau B"}],"ja":[{"name":"Mogk A"},{"name":"友安 俊文"},{"name":"Goloubinoff P"},{"name":"Rudiger S"},{"name":"Roder D"},{"name":"Langen H"},{"name":"Bukau B"}]},"publication_date":"1999-12","publication_name":{"en":"The EMBO Journal","ja":"The EMBO Journal"},"volume":"Vol.18","number":"No.24","starting_page":"6934","ending_page":"6949","languages":["eng"],"referee":true,"identifiers":{"issn":["0261-4189"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:45, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334608","label":"url"}],"paper_title":{"en":"Sequential mechanism of solubilization and refolding of stable protein aggregates by a bichaperone network.","ja":"Sequential mechanism of solubilization and refolding of stable protein aggregates by a bichaperone network."},"authors":{"en":[{"name":"Goloubinoff P"},{"name":"Mogk A"},{"name":"Zvi AP"},{"name":"Tomoyasu Toshifumi"},{"name":"Bukau B"}],"ja":[{"name":"Goloubinoff P"},{"name":"Mogk A"},{"name":"Zvi AP"},{"name":"友安 俊文"},{"name":"Bukau B"}]},"publication_date":"1999-11","publication_name":{"en":"Proceedings of the National Academy of Sciences of the United States of America","ja":"Proceedings of the National Academy of Sciences of the United States of America"},"volume":"Vol.96","number":"No.24","starting_page":"13732","ending_page":"13737","languages":["eng"],"referee":true,"identifiers":{"issn":["0027-8424"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:46, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334609","label":"url"}],"paper_title":{"en":"Trigger factor and DnaK cooperate in folding of newly synthesized proteins.","ja":"Trigger factor and DnaK cooperate in folding of newly synthesized proteins."},"authors":{"en":[{"name":"Deuerling E"},{"name":"Schulze-Specking A"},{"name":"Tomoyasu Toshifumi"},{"name":"Mogk A"},{"name":"Bukau B"}],"ja":[{"name":"Deuerling E"},{"name":"Schulze-Specking A"},{"name":"友安 俊文"},{"name":"Mogk A"},{"name":"Bukau B"}]},"publication_date":"1999-08","publication_name":{"en":"Nature","ja":"Nature"},"volume":"Vol.400","number":"No.6745","starting_page":"693","ending_page":"696","languages":["eng"],"referee":true,"identifiers":{"issn":["0028-0836"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:47, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334610","label":"url"}],"paper_title":{"en":"Role of region C in regulation of the heat shock gene-specific sigma factor of Escherichia coli, sigma32","ja":"Role of region C in regulation of the heat shock gene-specific sigma factor of Escherichia coli, sigma32"},"authors":{"en":[{"name":"Arsene F"},{"name":"Tomoyasu Toshifumi"},{"name":"Mogk A"},{"name":"Schirra C"},{"name":"Schulze-Specking A"},{"name":"Bukau B"}],"ja":[{"name":"Arsene F"},{"name":"友安 俊文"},{"name":"Mogk A"},{"name":"Schirra C"},{"name":"Schulze-Specking A"},{"name":"Bukau B"}]},"publication_date":"1999-06","publication_name":{"en":"Journal of Bacteriology","ja":"Journal of Bacteriology"},"volume":"Vol.181","number":"No.11","starting_page":"3552","ending_page":"3561","languages":["eng"],"referee":true,"identifiers":{"issn":["0021-9193"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:48, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334619","label":"url"}],"paper_title":{"en":"Heat shock regulation in the ftsH null mutant of Escherichia coli: dissection of stability and activity control mechanisms of sigma32 in vivo.","ja":"Heat shock regulation in the ftsH null mutant of Escherichia coli: dissection of stability and activity control mechanisms of sigma32 in vivo."},"authors":{"en":[{"name":"Tatsuta T"},{"name":"Tomoyasu Toshifumi"},{"name":"Bukau B"},{"name":"Kitagawa M"},{"name":"Mori H"},{"name":"Karata K"},{"name":"Ogura T"}],"ja":[{"name":"Tatsuta T"},{"name":"友安 俊文"},{"name":"Bukau B"},{"name":"Kitagawa M"},{"name":"Mori H"},{"name":"Karata K"},{"name":"Ogura T"}]},"publication_date":"1999-02","publication_name":{"en":"Molecular Microbiology","ja":"Molecular Microbiology"},"volume":"Vol.30","number":"No.3","starting_page":"833","ending_page":"844","languages":["eng"],"referee":true,"identifiers":{"issn":["0950-382X"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
line:49, {"insert":{"user_id":"B000001705","type":"published_papers"},"similar_merge":{"see_also":[{"@id":"https://web.db.tokushima-u.ac.jp/cgi-bin/edb_browse?EID=334614","label":"url"}],"paper_title":{"en":"Balanced biosynthesis of major membrane components through regulated degradation of the committed enzyme of lipid A biosynthesis by the AAA protease FtsH (HflB) in Escherichia coli.","ja":"Balanced biosynthesis of major membrane components through regulated degradation of the committed enzyme of lipid A biosynthesis by the AAA protease FtsH (HflB) in Escherichia coli."},"authors":{"en":[{"name":"Ogura T"},{"name":"Inoue K"},{"name":"Tatsuta T"},{"name":"Suzaki T"},{"name":"Karata K"},{"name":"Young K"},{"name":"Su LH"},{"name":"Fierke CA"},{"name":"Jackman JE"},{"name":"Raetz CR"},{"name":"Coleman J"},{"name":"Tomoyasu Toshifumi"},{"name":"Matsuzawa H"}],"ja":[{"name":"Ogura T"},{"name":"Inoue K"},{"name":"Tatsuta T"},{"name":"Suzaki T"},{"name":"Karata K"},{"name":"Young K"},{"name":"Su LH"},{"name":"Fierke CA"},{"name":"Jackman JE"},{"name":"Raetz CR"},{"name":"Coleman J"},{"name":"友安 俊文"},{"name":"Matsuzawa H"}]},"publication_date":"1999-02","publication_name":{"en":"Molecular Microbiology","ja":"Molecular Microbiology"},"volume":"Vol.31","number":"No.3","starting_page":"833","ending_page":"844","languages":["eng"],"referee":true,"identifiers":{"issn":["0950-382X"]},"published_paper_type":"scientific_journal"},"priority":"input_data"}
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